Lemur catta (Ring-tailed lemur): 123633404
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Entry
123633404 CDS
T08326
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03082
ATP-dependent chromatin remodeling
lcat04714
Thermogenesis
lcat05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123633404 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123633404 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123633404 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123633404 (ARID1B)
03021 Transcription machinery [BR:
lcat03021
]
123633404 (ARID1B)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123633404 (ARID1B)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
Helix-turn-helix
ARID
123633404 (ARID1B)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123633404 (ARID1B)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123633404 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
123633404
NCBI-ProteinID:
XP_045400581
LinkDB
All DBs
Position
2:138296758..138694556
Genome browser
AA seq
2359 aa
AA seq
DB search
MAARAAAAAAAARARAGSGERRAPPGPRPAPGARDLEAGARVAAAAPGPMLGGGGDGGLN
SVHHHPLHPRHELNMAHNASAAAAAASTNSAKSGGSEAALKEGGSAAALSSSSSSSSAAA
SSSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHHAHHLHHHHA
LQQQLNQFQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSASGSQA
DPPGQPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVSEFN
NYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAGAPSSMDPLQNSHEGYPN
SQYNHYPGYSRPGAGGGGGGGGGSGGGGGGGGGAGAGAGGAGAGAVAAAAAAAAAAAAAG
GGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAGGFQRFAGQNQH
PSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA
GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM
GSNPHSQPQQSSPYPGGSYGPPGPQRYPLGIQGRTPGAMGGMQYPQQQMPPQYGQQGVSG
YCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNH
EDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHA
SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQS
PMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQM
SQYGPQGNYSRPPAYSGVPSASYSGPGPGVGISANNQMHGQGPSQPCGAVPLGRMPPAGM
QSRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSF
PGMTQSGLMASSSPYSQPMNNSSGLMNTQAPPYSMTPTMVNSSAASMGLADMMSPGESKL
PLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESD
SISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLP
AVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFA
FECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLK
PPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMGMPDVMG
RMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPY
GASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDM
YGMQYGNQQQEMYNQYGSSYSGPDRRPVQAQYPYPYSRERAQAPGQVQAHGVPPQVMGGP
MQSSSGEGPQQNMWAARNDMPYPYQNRQGPGGPAQAPPYPGMSRTDDLMVPDQRINHESP
WPSHVSQRQPYMSSSASMQPITRPPQPAYQTPPSLPNHISRAPSPASFQRSLENRMSPSK
SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDI
VTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCL
IDIFGILMEYEVGDPSQKALDHNAVRNDDNQSLADDSGKEEEDAECIDEEEEDDEEDEEE
DSEKAEAEDKSSTALPVPDATADPQEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQ
EFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSTSRKKEQEGKGDSEEQQE
KSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETP
LCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKR
APQTYEKEEDGDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILD
GLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEK
FYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMA
QYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAV
LNSLVASVICDVLFQIGQL
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacgggcagcagcggcggcggcggcggcgcgggcgcgggcaggcagcggcgag
cggcgggcgcccccagggccgcggccggcgcccggggcccgggacctggaggcgggggcg
cgcgtggcggcggcggcaccgggacccatgctggggggcggcggcgacggcggcctgaat
agtgtgcaccaccaccccctgcacccccgtcacgaactgaacatggcccataacgcgagc
gccgcggccgccgccgccagcactaacagcgccaagagcggcggctccgaggcggctctc
aaggagggtggaagcgctgccgcgctgtcctcctcctcctcctcctcctccgcggcggcg
tcctcttcttcctcctcgtcgggcccgggctcggccatggagacggggctgctccccaac
cacaaactgaaaaccgttggcgaagcccccgccgcaccgccccaccagcagcaccaccac
caccaccatgcccaccaccaccaccaccaccatgcccaccacctccaccaccaccacgca
ctacagcagcagctaaaccagttccagcagcagcagcagcaacagcagcagcagcagcaa
catcccatttccaacaacaacagcctgggcggcgcgggcggcggcgcgcctcagccgggc
cccgacatggagcagccgcaacatggaggcgccaaggacagtgcctcgggcagccaggcc
gaccccccgggccagccgctgctgagcaagccgggcgacgaggacgacgcgccgcccaag
atgggggagccggcgggcggccgctacgagcacccgggcctaggcgccctgggcacgcag
cagccgccggtcgccgtgcccgggggcggcggcggcccggcggccgtctcggagtttaat
aattactatggcagcgctgcccctgctagcggcggccccggcggccgcgctgggccttgc
tttgatcaacatggcggacaacaaagccccgggatggggatgatgcactccgcctcagcc
gccgccggggcccccagcagcatggaccccctgcagaactcccacgaagggtaccccaac
agccagtacaaccattatccgggatacagccggcccggcgcgggcggcggcggcggagga
ggaggaggcagcggaggaggaggaggaggaggaggaggagcaggagcaggagcaggagga
gcaggagcgggagctgtggcggcggcggccgcggcggcggcggcggcagcagcagcagga
ggcggcggcggcggcggctatgggggctcgtcctcggggtacggggtgctgagctccccc
cggcagcagggcggcggcatgatgatgggccccgggggcggcggggccgcgagcctcagc
aaggcggccgccggcgcggcggcggggggcttccagcgcttcgccgggcagaaccagcac
ccgtcgggggccaccccgaccctcaaccagctgctcacctcgcccagccccatgatgcgg
agctacggcggcagctaccccgactacagcagccccagcgcgccgccgccgccgccgtcg
cagccccagtcccaggcggcggcggcgggggcggcggcgggcggccagcaggcggccgcg
ggcatgggcttgggcaaggacatgggcgcccagtacgccgctgccagcccggcctgggcg
gccgcgcaacaaaggagtcacccggcgatgagccccggcacccccggaccgaccatgggc
agatcccagggcagcccaatggatccaatggtgatgaagagacctcagttgtatgggatg
ggcagtaaccctcactctcagcctcagcagagcagtccctacccaggaggttcctatggc
ccccccggcccacagcggtaccctctcggcatccagggtcggactccaggggccatggga
ggaatgcagtacccacagcagcagatgccacctcagtatggacagcaaggtgtgagtggt
tactgccagcagggccaacagccatattacagccagcagccacagcccccgcacctcccg
ccccaggcgcagtacctgccgtcccagtcccagcagaggtaccagccacagcaggacatg
tctcaggaaggctatggaactaggtctcaacctcctctggcccccggaaaaccaaaccat
gaagacttgaacttaatacaacaagaaagaccatctagtttaccagatctgtcaggttcc
atcgatgacctccccactggaacggaggcaactttgagctcagcagtcagtgcatccggg
tccacgagcagccagggggaccagagcaacccagcacagtcacctttctctccacacgcg
tccccccatctctccagcatcccagggggcccgtcgccttctcctgttggctctcctgta
ggaagcaaccagtcgcgatctggcccgatttctcctgcaagtattccaggcagtcagatg
ccacctcagccacctgggagccagtcagagtccagctcccatcctgccttgagccagtca
ccaatgccacaggagagagggtttatggcaggcacacaaagaaacccgcagatgtctcag
tatggacctcaacagacaggaccctccatgtcgcctcatccttctcctgggggccagatg
catcctggaatcagtagctttcagcagagtaactcaagtgggacttacggtccacagatg
agccagtatggaccacaaggtaactactccagacccccagcgtatagtggggtgcccagt
gcaagctacagcggcccagggcccggtgtgggtatcagtgccaacaaccagatgcatgga
caagggccaagccagccatgtggtgctgtgcccctgggacgaatgccaccagctgggatg
cagagcagaccatttcctggaaatatgagcagcatgacccccagttctcctggcatgtct
cagcagggagggccaggaatggggccgccaatgccaactgtgaaccgtaaggcacaggag
gcagctgcagcagtgatgcaggctgctgcaaactcagcacaaagcaggcaaggcagtttc
cctggcatgacccagagtggacttatggcttccagctctccctacagccagcccatgaac
aacagctctggcctgatgaacacgcaggcgccgccgtacagcatgacgcccaccatggtg
aacagctcggcagcatctatgggtcttgcagatatgatgtctcctggtgaatccaaactg
cccctgcctctcaaagccgatggcaaagaggaaggcactccgcagcctgagagcaagtca
aaggatagctacagctctcagggtatttctcagcccccaaccccaggcaacctgccagtc
ccttccccaatgtcccccagctctgctagcatctcctcatttcatggagatgagagtgat
agcattagcagcccaggctggccaaagactccatcaagccctaagtccagctcatccacc
accactggggagaagatcacaaaggtgtatgagctggggaatgagccagagagaaaactc
tgggtcgaccgataccttaccttcatggaggagagaggctcccctgtctcgagcctgcct
gcagtgggcaagaagcccttggacctgttccgactctatgtctgcgtcaaagagattgga
ggtttggcacaggttaataaaaacaagaagtggcgtgagctggcaaccaacctaaatgtt
ggcacttcaagtagtgcagcaagctccctgaaaaagcagtatattcagtacctgtttgcc
tttgagtgcaagatcgagcgaggggaggagcccccgccagaagtcttcagcaccggcgac
acgaagaagcagcccaagctccagccgccatctcctgctaactcaggatccttgcaaggc
ccacagaccccccagtcaactggcagcaattccatggcagaggttccaggtgatctgaag
ccacctaccccggcctccacccctcatggacagatgaccccaatgcaaggtggaagaagc
agtacaatcagtgtgcacgacccattctcagacgtcagtgattcgtccttcccaaaacgg
aactccatgactccaaatgccccataccagcagggcatgggcatgccggatgtgatgggc
aggatgccctatgaacccaacaaggacccctttgggggcatgagaaaagtgcctggaagt
agcgagccgtttatgacgcaaggacagatgcccaacagcagtatgcaggacatgtataac
cagagtccctccggagcaatgtccaacctgggcatggggcagcggcagcagtttccctac
ggagccagttacgatcgaaggcatgaaccttatggacagcagtatccaggccaaggtcct
ccctcgggacagccgccatatggagggcaccagccgggcctgtacccacagcagccgaat
tacaaacgccatatggacggcatgtatgggcctccagccaagcgccatgagggagacatg
tacggcatgcagtacggcaaccagcagcaggagatgtacaaccagtacggaagctcctac
tcggggcccgaccggaggcctgtccaggcacagtacccctacccctacagcagagagcgg
gcgcaggccccggggcaggtgcaggcgcacggggtcccgccgcaggtgatgggtggcccg
atgcagtcgtcctctggtgaagggcctcagcagaacatgtgggcggcccgcaatgacatg
ccttacccctaccagaacaggcagggccccggcggtcctgcgcaggcccctccttatcca
ggcatgagccgcacggacgatctgatggtacctgaccagaggataaatcacgagagcccg
tggccttctcacgtcagccagcgtcagccttacatgtcatcgtcagcctccatgcagccc
atcacgcgcccgccgcagccggcctaccaaacgccaccgtcactgccaaatcacatctcc
agggcgcccagcccagcatccttccagcgctccctggagaaccgcatgtctccaagcaag
tctcccttcctgccctctatgaagatgcagaaggtcatgcccacagtccccacatcccag
gtcactgggccacccccccagccaccccccatcagaagggagatcacctttcctcccggc
tcagtggaagcatcccagccagtcttgaaacaaaggcgaaagattacctcaaaagatatc
gttactcctgaggcgtggcgtgtgatgatgtccctgaaatcaggtcttttggctgagagt
acgtgggctttggacactattaatattcttctgtatgacgatagcactgttgctactttc
aatctctcccagctgtctggatttcttgaactcttagtcgagtactttagaaaatgcctg
attgacatttttggaattctcatggaatacgaagtgggagaccccagccaaaaagcactt
gaccacaacgcagtgaggaacgatgacaaccagtctctggcagacgattctgggaaagag
gaagaagatgctgaatgtattgacgaggaggaggaggatgacgaggaggacgaggaagaa
gacagcgagaaggcagaagccgaagataagagcagtactgctctgcccgtgccggacgcc
actgcggacccacaggagaagcctaagcaagccagcaagtttgacaagctgccaataaag
atagtcaaaaagaacaacctgtttgttgttgaccgatctgacaagctgggccgcgtgcag
gagttcagcagtggacttctgcattggcagcttggtgggggtgacaccacggagcacatc
cagactcactttgagagcaagatggagattcctcctcgcaggcgcccacctcccccttta
agctccacaagcagaaagaaagagcaggaaggcaaaggggattctgaagagcagcaggag
aaaagcatcatagcgaccattgatgacgtcctgtctgctcggccaggggcgctgcccgaa
gacgcaaaccctgggccccaaaccgaaagcagtaagtttcccttcggtatacaacaagcc
aaaagtcaccggaacatcaagctgctggaggacgagcccaggagccgagacgagactcct
ctgtgcacgattgcgcactggcaggactcgctggctaaacgctgcatctgtgtgtccaat
atcgtccgtagcttgtcctttgtgcctggcaatgatgccgaaatgtccaaacatccaggc
ttggtgctgatcctggggaagctgattcttcttcaccacgagcatccagagagaaaacga
gcaccgcagacctatgagaaagaggaggacggggacaagggggtggcctgcagcaaggac
gagtggtggtgggactgcctcgaggtcttgagggataacacgttggtcacgttagccaac
atttctgggcagctagacttgtctgcttacacagaaagcatctgcttgccaattttggat
ggcttgctgcactggatggtgtgcccatctgcagaggcacaagacccctttccaactgtg
ggacccaactcggtcctgtcgcctcagagacttgtgctggagaccctctgtaaactcagt
atccaggacaacaatgtggacctgatcttggccactcctccatttagtcgtcaggagaaa
ttctatgctacgttagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatg
tccatggcgcttttatcgaaccttgcccaaggggatgcgctagcagcaagggcaattgct
gtgcagaaaggaagcattggaaacttgataagcttcctggaggatggggtcacgatggcc
cagtaccagcagagccagcataacctcatgcacatgcagcccccgcctctggaaccacct
agtgtagacatgatgtgcagggcggccaaggctttgctggccatggccagagtggacgaa
aaccgctctgaattccttttgcacgagggccggttgctggatatctcgatatcagctgtc
ctgaactctctggttgcatctgtcatctgtgacgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
