KEGG   Lemur catta (Ring-tailed lemur): 123634666
Entry
123634666         CDS       T08326                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 1-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat03082  ATP-dependent chromatin remodeling
lcat03083  Polycomb repressive complex
lcat04110  Cell cycle
lcat04213  Longevity regulating pathway - multiple species
lcat04330  Notch signaling pathway
lcat04350  TGF-beta signaling pathway
lcat04613  Neutrophil extracellular trap formation
lcat04919  Thyroid hormone signaling pathway
lcat05016  Huntington disease
lcat05031  Amphetamine addiction
lcat05034  Alcoholism
lcat05165  Human papillomavirus infection
lcat05169  Epstein-Barr virus infection
lcat05200  Pathways in cancer
lcat05202  Transcriptional misregulation in cancer
lcat05203  Viral carcinogenesis
lcat05206  MicroRNAs in cancer
lcat05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    123634666
   03083 Polycomb repressive complex
    123634666
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    123634666
   04350 TGF-beta signaling pathway
    123634666
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    123634666
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    123634666
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    123634666
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    123634666
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    123634666
   05202 Transcriptional misregulation in cancer
    123634666
   05206 MicroRNAs in cancer
    123634666
   05203 Viral carcinogenesis
    123634666
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    123634666
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    123634666
   05165 Human papillomavirus infection
    123634666
  09164 Neurodegenerative disease
   05016 Huntington disease
    123634666
  09165 Substance dependence
   05031 Amphetamine addiction
    123634666
   05034 Alcoholism
    123634666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcat03036]
    123634666
Enzymes [BR:lcat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     123634666
Chromosome and associated proteins [BR:lcat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     123634666
   HDAC complexes
    Sin3A-HDAC complex
     123634666
    BRAF-HDAC complex
     123634666
    REST complex
     123634666
    SHIP complex
     123634666
    MiDAC complex
     123634666
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     123634666
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    123634666
  Chromatin remodeling factors
   NuRD complex
    123634666
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 123634666
NCBI-ProteinID: XP_045402356
LinkDB
Position
3:39306256..39307608
AA seq 445 aa
MTHNSLLNYGLYRKMEIYRPHKASAEEMTKYHSDDYIKFLFSIRPDNMSEYSKQMQRFNV
GEDCPVFDGLFEFCQSSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNNI
VLAILELLKYHQRVLYIDIDIHHGDGMEEAFYTTDQVITVSFHKYGEYFPGTGDLQDIGA
GKGKYYAVNYPLRGEIDDESYEAIFKPVMSKVMEMFQPSVVVLQCGSDSLARDRLGCFNL
TIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVAQCWTYETAVALDTEIPNELPYNDYFEY
FGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPKAAIPEESGDE
DEEDPDKRISIYSXKRTACEEEFSDSDEEGEGGRKNSANFKKAKRVKTEDEKEKDPEEKK
EVTEEEKTKDEKPEAKGVKEEVKLA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgactcacaattcgctgcttaactatggtctctaccgaaaaatggaaatctatcgccct
cacaaagccagtgctgaggagatgaccaagtaccacagtgatgactacattaaattcttg
ttctccatccgtccagataacatgtccgaatacagcaagcagatgcagagattcaacgtt
ggtgaggactgtccagtatttgatggcctgtttgagttctgtcaatcgtctactggtggc
tctgtggcaagtgctgtgaaacttaataagcagcagacggacatcgctgtgaattgggct
gggggcctgcaccatgcaaagaagtccgaggcatctggcttctgttacgtcaataatatc
gtcttggccatcctggaattgctaaagtatcaccagagggtgctgtatattgacattgat
attcaccatggagatggcatggaagaggccttctataccacagaccaggtcataactgtg
tcctttcataaatatggagagtacttcccaggaactggggacctacaggatattggggct
ggcaaaggcaagtattatgctgttaactacccgctccgaggtgagattgatgacgagtcc
tatgaggccattttcaaaccggtcatgtccaaagtaatggagatgttccagcctagtgtg
gtggtcttgcagtgtggctcagattccctggctagggatcggttaggttgcttcaatctg
accatcaaagggcatgccaagtgtgtggaatttgtcaagagcttcaacctgcctatgttg
atgttgggaggaggtggttacaccattcgtaatgttgcccagtgctggacatatgaaaca
gctgtggccctggacacagagatccctaatgagcttccatacaatgactacttcgaatac
tttggtccagatttcaagcttcacatcagtccttccaatatgactaaccagaatactaat
gagtacttggagaaaatcaaacagcgactgtttgagaacctgaggatgctgccccatgct
cctggggtccaaatgcaggcgattcccaaggctgccatcccagaagaaagtggcgatgaa
gatgaagaagaccctgacaagcgcatctcaatctattccntcaaacgaactgcctgtgag
gaagagttctctgactctgatgaggaaggagagggcggccgcaagaactctgccaacttc
aaaaaagccaagagagtcaaaacagaggatgaaaaagagaaagatccagaagagaagaaa
gaagtcacagaagaggagaaaaccaaggacgagaagccagaagccaaaggggtcaaggag
gaggtcaagttggcctga

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