Lemur catta (Ring-tailed lemur): 123635274
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Entry
123635274 CDS
T08326
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04115
p53 signaling pathway
lcat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123635274 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
123635274 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcat04121
]
123635274 (COP1)
Enzymes [BR:
lcat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123635274 (COP1)
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123635274 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123635274 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
123635274
NCBI-ProteinID:
XP_045403250
LinkDB
All DBs
Position
3:39407572..39652842
Genome browser
AA seq
731 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALVSGGAAQAAGSGS
VGAPVRPVLVAAAVSGSGGGAVSAGLSRLSCAARPSAGVGGSSSSVGSGSRKRPLLAPLC
NGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNI
DHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNL
MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS
GLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRL
TAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNG
SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSS
YHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKL
WSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRK
AVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSE
NNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAAN
SQGTIKVLELV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagccgccaggccgggtcgggctccgctgggacgagccctggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttatcgtcttccccgtcgcccccttccgtg
gcggcttcggcggcggcgctggtgtccggcggggcggcccaggcagcgggctcgggcagc
gtcggggccccggtgcggcctgtgttggtggcggccgccgtgtcgggcagcggcggcggg
gcggtgtccgcgggcctgtcccggctcagctgcgcggccaggcccagcgccggcgtagga
gggagcagctccagtgtaggcagcggcagcaggaagcgacctctgctcgcccccctgtgc
aacgggcttatcaactcctatgaggacaaaagcaacgacttcgtatgccccatctgcttt
gatatgattgaggaagcatacatgacgaaatgtggccacagcttttgctacaagtgtatt
catcagagtttggaggacaataatagatgtcccaagtgtaactatgttgtggacaatatt
gaccatctgtatcctaatttcttggtgaatgagctcattctcaaacagaagcaaagattt
gaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggccacaggtggcaa
atatttcaagatttgttgggaactgaccaagataaccttgatctggccaatgtcaacctc
atgttggagttactagtgcagaaaaagaaacaactggaagcagaatcacatgcagcccaa
ctacagattcttatggaattcctcaaggttgcaagaagaaataagagagagcaactggaa
cagatccagaaggagctaagtgttttggaagaggatattaaaagagtggaagaaatgagt
ggcttatattctcctgtcagtgaggatagcacagtgcctcaatttgaagctccttctcca
tcacacagtagtattattgattccacagaatacagccaaccaccaggtttcagtggcagt
tctcagacaaagaaacagccttggtataacagcacattggcatcaagacgaaaacgactc
actgctcattttgaagacttagagcaatgttacttttctacaaggatgtctcgtatctca
gatgacagtcgaactgcaagccagttggacgagtttcaggaatgcttgtctaagtttact
cggtataattcagtacgacctttggctacgttgtcatatgctagtgatctctataatggt
tccagcatagtctccagtattgaatttgacagggattgtgactattttgcaattgctggg
gttacaaaaaagattaaagtctatgaatatggcacagtcatccaggatgcagtggatatt
cattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagt
taccataagaacctgttagctagcagtgattatgaaggcactgttatcctatgggatgga
ttcacaggacagagatcaaaggtgtatcaggagcatgagaagaggtgttggagtgttgac
tttaatttgatggatcccaaactcttggcttcaggttccgatgatgcaaaagtgaagctg
tggtccaccaacctagacaactcagtggcaagcattgaggcaaaggctaatgtgtgctgt
gttaaattcagcccctcttccagataccatttagctttcggctgtgcagatcactgtgtc
cactactatgatcttcgtaacactaaacaaccaatcatggtattcaaaggacaccgaaaa
gcggtctcttatgcaaagtttgtgagtggtgaggaaattgtctctgcctcaacagacagc
cagctaaaactgtggaatgtagggaaaccatactgtctacgttccttcaagggtcacatc
aatgaaaaaaactttgtaggccttgcttccaatggagattatatagcttgtggaagtgag
aacaactccctctacttgtactataaaggactttctaagactttgctaacttttaagttt
gacacagtcaaaagtgttctggacaaagaccgaaaagaagatgatacaaatgaatttgtt
agtgctgtatgctggagagcactaccagatggggagtccaatgtgctgattgctgctaac
agtcagggtacaattaaggtgctagagttggtatga
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