Lemur catta (Ring-tailed lemur): 123635319
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Entry
123635319 CDS
T08326
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123635319 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123635319 (XAB2)
03041 Spliceosome [BR:
lcat03041
]
123635319 (XAB2)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123635319 (XAB2)
Spliceosome [BR:
lcat03041
]
Complex B
Other components
Prp19-related factors
123635319 (XAB2)
Complex C
123635319 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
123635319
NCBI-ProteinID:
XP_045403350
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All DBs
Position
1:complement(111669056..111677862)
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AA seq
855 aa
AA seq
DB search
MVVMARLSRAERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctctcgcgggccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctcagtcaaatgctggctccgc
tacatcgagttcaaacagggtgccccgaagcccaggctcaatcagctgtatgagcgggca
cttaagctgctgccctgcagctataaactctggtaccgctacctgaaggcacggcgggca
caggtgaagcatcgctgtgtgactgaccctgcctatgaagatgtcaacaactgccatgag
agagcctttgtgttcatgcacaagatgccccgtctatggttggattattgccagttcctg
atggaccaggggcgtgtcacacacacccgccgtaccttcgaccgtgccctccgggcactg
cccatcacgcagcactctcgcatctggcccttgtacctgcgcttcctgcgctcacaccca
ctgcccgagacagccgttcgaggctaccggcgcttcctcaagctgagccccgagagtgca
gaggagtacattgagtacctcaagtcgagtgaccggctggatgaggctgcacagcgcctg
gccaccgtggtgaacgatgagcgtttcgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctatgtgacctcatctcccagaacccagacaaagtgcagtccctcaatgtg
gacgccatcatccgcgggggcctcacccgcttcactgaccagctggggaagctctggtgc
tctctggctgactactacatccgcagtggccacttcgagaaggctcgggacgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgttcgacagctatgcc
cagttcgaggagagcatgattgctgctaagatggagaccgcctcggagctagggcgcgag
gaggaggatgatgtggacttggagctgcgcctggcccgctttgagcagctcatcagccgg
aggcctcttctcctcaacagcgtcttgctgcgccagaacccacaccatgtgcacgagtgg
cacaagcgtgtggccctgcaccagggccggccccgggagatcatcaacacatacacggag
gctgtgcagacagtagaccccttcaaggccacaggcaagccccacacactatgggttgcg
tttgccaagttctatgaggacaacgggcagctggatgatgcccgcgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggccagtgtgtggtgccagtgcggg
gagctggagctccgacacgagaactacgacgaggccttgcggctgctgcggaaggccacg
gcactgcctgcccgccgggccgagtacttcgacggctcggagcctgtgcagaaccgtgtg
tataagtccctgaaggtgtggtcgatgctcgccgacctggaggagagccttggcaccttc
cagtccaccaaggccgtgtacgaccgtatcctggacctgcgcattgccacaccccagatt
gtcatcaactatgccatgttcctggaggagcacaagtactttgaagagagcttcaaggcg
tacgagcgcggcatctcgctgtttaagtggcccaatgtgtccgacatctggagcacctac
ctgaccaaattcatcgcccgctatgggggccgcaaactggagcgggcgagggacctcttc
gagcaggcgctggacggctgccctcccaaatacgccaagaccctgtacctgctgtacgcg
cagctggaggaggaatggggcctggcccggcacgccatggctgtgtacgagcgggccacc
agggctgtggaacctgcccagcagtacgacatgttcaacatctacatcaagcgggcagct
gagatctacggagtcacccacacccgtggcatctaccagaaggccatcgaggtcctgtcg
gacgagcacgcccgcgagatgtgtctgcggttcgcggacatggagtgcaagctcggggag
atcgaccgcgcccgggccatctacagcttctgctcccagatctgcgacccccggacaaca
ggcgcattctggcagacgtggaaggacttcgaggtccggcatggcaatgaggacaccatc
aaggagatgctgcgcattcgccgcagcgtgcaggccacgtacaacacgcaagtcaacttc
atggcttctcagatgctcaaggtgtcgggcagcgccacaggcaccgtgtctgacctggcc
ccagggcagagcggcatggacgacatgaagctgctggagcagcgggcggagcagctggca
gccgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagc
gacgcgtcccgggaggagctggcggagctggcgcagcaggtcaaccccgaggagatccag
ctgggtgaggacgaggacgaggacgagatggacctggagcccaatgaggtccggctggag
cagcagagcgtgccggccgcagtgttcgggagcctgaaggaagactga
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