Lemur catta (Ring-tailed lemur): 123636581
Help
Entry
123636581 CDS
T08326
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123636581 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123636581 (CPSF3)
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123636581 (CPSF3)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123636581 (CPSF3)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123636581 (CPSF3)
U7-dependent histone pre-mRNA processing factors
123636581 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
123636581
NCBI-ProteinID:
XP_045404963
LinkDB
All DBs
Position
4:5874531..5911967
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVNVKDGSVLSVTVDGKTANLNLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggagagcgaccagctgctgatccgaccccttggagctggg
caagaagtgggaagatcatgtattattctggagttcaaaggaagaaaaataatgctggac
tgtgggatccaccctggcctagaaggaatggatgctcttccttatattgatttaattgac
ccagctgagattgatctcctattaattagtcatttccatttggatcactgtggagctttg
ccctggtttctgcagaagacgagtttcaaaggaagaacatttatgactcatgccacaaaa
gctatttatagatggcttctttcggattatgtcaaagttagtaacatatcagcagacgac
atgctgtatactgagacagatttggaggaaagcatggacaagattgaaactatcaacttt
catgaagttaaggaggttgcaggaatcaagttttggtgttaccacgcaggccatgtcctg
ggagccgccatgtttatgattgagatcgcgggtgtgaagcttttgtacacaggtgatttc
tcaagacaagaagataggcacttaatggcagcagaaattcctaatattaaacctgacatt
cttatcattgaatctacttatgggacccacatccatgagaaacgtgaagagcgagaagcg
agattctgtaacactgtccacgatattgtaaatagagggggcagaggtcttattcctgtc
tttgctcttggaagggctcaggagctgctcttgattctggatgaatattggcagaatcac
ccagaactacatgacattccaatatactatgcgtcatctttggccaagaagtgtatggca
gtgtaccagacgtatgtaaatgcaatgaatgacaaaattcgcaaacagatcaacatcaat
aatccttttgttttcaaacacattagtaacctcaagagcatggatcattttgatgacatt
ggtcccagtgttgtaatggcctccccaggcatgatgcaaagtggcttatccagagagtta
tttgaaagttggtgtactgataagaggaatggcgtcattatagcaggatactgtgtagaa
gggacacttgccaagcatatcatgtctgaacctgaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttatccgtgctttgaaaccgcctcatgtgattttagtccatggagaa
cagaacgaaatggccagattaaaagcagcactgattcgagaatatgaagataatgatgaa
gttcacatagaggttcataatcctcggaatacagaagcagtgaccttaaacttcagagga
gaaaaactagccaaggttatgggctttttagcagacaaaaaaccagaacaaggccaacgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacttg
tctaattatactgacctggccatgagcactgtgaaacagacccaagccatcccatatact
ggtccctttaatttgctctattaccagctacagaaattgacaggtgatgtagaagaatta
gaaattcaagaaaaacctgctctgaaagtgttcaaaaatattactgtaatacaagaacca
ggcatggtggtattagaatggttggcaaacccttctaatgatatgtatgcagatacagta
acaactgtgatattggaagttcagtcaaatccaaaaataaggaaaggtgcagtacaaaag
gtttctaaaaagttagaaatgcacgtttatagcaagagattggagatcatgctccaggac
atatttggagaagactgtgtaaatgtaaaagatggctctgttcttagtgtcacagtggat
ggaaaaactgctaaccttaacttggagacccggactgtagaatgtgaagaaggaagtgaa
gatgatgaatctctccgagaaatggtggaactggctgcacagagactatatgaggccctt
acaccagttcattga
DBGET
integrated database retrieval system
