Lemur catta (Ring-tailed lemur): 123636588
Help
Entry
123636588 CDS
T08326
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123636588 (TAF1B)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
123636588 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF4661
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
123636588
NCBI-ProteinID:
XP_045404980
LinkDB
All DBs
Position
4:6186333..6253689
Genome browser
AA seq
592 aa
AA seq
DB search
MDLEEAKEFKERCTQCAAVSWGLTDEGKYYCTSCHNVTERSKEVINTEDIPNTKIKAINR
GLKRKKKLEKGWDWYVCEGFQYILYQQAEALKSLGVGPELKNEVLHNFWKRYLQKSKQAY
CENPIYTTRKKATVLEDNLSHSDWSSEPELLSDVGCPSFVESGAESQSDTYSQKPFPLSS
RASQSEMASSVCSGSLDGVEYSQRKEKGTVKMSVPRTLALCYLSLLWQRETITLSDLLRF
VEEDHIPYVNAFQHFPEEMKLYGRDKRIFAVESWPDYEDIHKKTIEIATFLDLPRFPNIT
EDCYLHPNILCMKYLMEVNLPDEMHGLACQVIKMTGIGEVDFLTFDPIAKMAKTVKYDVQ
AVAIIVVVLKLLFLLDDNFEWSLSNLAEKYNKKNKKDKPWFDFRKWYQVMKKTVDEKKHK
WEEARAKYMWKSEKPLYYSVIDKPVVYKRRDMVVNLQKQFSALVGWTPAVEKKRPSSFQF
NWTEEDTDRTCFHGHSLQGVLKEKGQSLLTKNSSYWLSTQKFCKGYCKHLTTYEESNFSL
SYQFILNLFSFLLRIKTSLLHEEVSLIERKLFKNKYSKTKKKSRRSRKARRH
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacctagaggaggcgaaagagtttaaggagcgctgtactcagtgtgctgctgtctct
tggggtcttactgatgaaggcaagtattactgcacttcttgccacaatgttacagagaga
tctaaggaagttataaacactgaggatattcctaataccaagataaaagccattaaccgg
gggcttaaaagaaaaaaaaagcttgaaaaaggctgggattggtatgtgtgtgaaggtttt
cagtacatactttatcaacaagcggaagccttaaagagccttggagtaggcccagagtta
aagaatgaagttttacataatttttggaagcgctaccttcagaagagcaagcaggcgtat
tgtgaaaacccaatttataccactagaaagaaagctacggtattagaagataatctaagt
cattcagactggagtagtgagcctgagctgctaagtgatgttggctgtccctcttttgtt
gaaagtggagcagagtcacagtctgacacctacagtcaaaagcctttccccctcagcagc
agagcatcacaatcagaaatggcatcgtctgtctgttctggatctcttgatggagtggag
tactcacaacgaaaggagaagggaactgtgaagatgtctgtgccaagaacacttgctctc
tgctatctgtcgttactttggcagagagaaacaataacactttcagatctcttgcgattt
gttgaagaggaccatattccttacgtaaatgcttttcagcattttccagaagagatgaaa
ttatatgggcgtgacaaaagaatctttgctgtagagtcttggcctgactatgaagatatc
cataaaaaaacaattgaaattgccacatttttagatttgcctcgttttccaaacataact
gaagactgctatcttcatcccaacatcttgtgtatgaaatacttaatggaagtcaatctc
cctgatgaaatgcacggtttagcctgccaagtgataaaaatgactggaataggagaagtg
gattttctgacatttgatcctatagctaaaatggcaaaaactgttaaatatgatgtgcaa
gctgtagctatcattgtagtagtattgaaactgctctttttattggatgacaatttcgaa
tggtctttgtctaatcttgctgaaaaatataataaaaagaacaaaaaagataagccatgg
tttgatttcagaaagtggtaccaagttatgaagaaaactgttgatgagaaaaaacataaa
tgggaggaagcaagggcaaagtacatgtggaaaagtgaaaagccactctactactcagtc
atcgacaaaccagtagtatataaaagaagagacatggtggtgaatctacaaaaacaattt
agcgcactggttggttggacaccagctgttgaaaaaaaacgcccctcaagttttcagttc
aactggactgaagaagacactgatagaacttgtttccatggacacagcctccagggagtc
ctgaaggagaaaggccagtcactgctaaccaagaattcatcatattggcttagtacacag
aaattctgtaaaggctattgtaaacatttgacaacctatgaagaatcaaatttttctctg
agttaccagtttatactaaatctcttctccttcctgctaagaataaagacctccttactc
catgaagaagtgagcttaattgaaaggaaactttttaaaaacaaatacagtaaaacaaaa
aagaaatctagaagatccaggaaagcaagaaggcattga
DBGET
integrated database retrieval system
