KEGG   Lemur catta (Ring-tailed lemur): 123636630
Entry
123636630         CDS       T08326                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat04512  ECM-receptor interaction
lcat04514  Cell adhesion molecule (CAM) interaction
lcat04820  Cytoskeleton in muscle cells
lcat05144  Malaria
lcat05205  Proteoglycans in cancer
lcat05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    123636630 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    123636630 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    123636630 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    123636630 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    123636630 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    123636630 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcat04131]
    123636630 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:lcat04090]
    123636630 (SDC1)
   00535 Proteoglycans [BR:lcat00535]
    123636630 (SDC1)
Membrane trafficking [BR:lcat04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    123636630 (SDC1)
CD molecules [BR:lcat04090]
 Proteins
  123636630 (SDC1)
Proteoglycans [BR:lcat00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   123636630 (SDC1)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 123636630
NCBI-ProteinID: XP_045405046
LinkDB
Position
4:complement(14037179..14059159)
AA seq 310 aa
MKRAALCLWLCALALRLQPALPQIVATNVPPEDQDGSGDDSDNFSGSGAGAFQDSTLSQQ
TPSTWKDMWLLTTTPMAPEPTGPEGTATFTSILLTGGGPEEGEAVVLAEAEPGLTAQEQE
ATLPPRETTQLSTTHRATTARATTAQAPATSHPHRDMQPGHHETSAPTGPGQADPHIPSV
EDGGSFPTETAAEDGASNQLPAGEGSGEQDFTFETSGENTVGVAIEPDHRNQPPVDQGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFVLYRMKKKDEGSYSLEEPKQANGGAYQ
KPTKQEEFYA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaagcgcgcggcgctctgcctctggctttgcgcgctggcgctgcgcctgcagccggcc
ctcccgcaaattgtggccacaaatgtgccccctgaagatcaggacggttctggggatgac
tctgacaacttttccggctcaggcgcaggtgcttttcaagacagcaccttgtcacagcag
accccctccacctggaaggacatgtggctcctgacaaccacgcccatggctcccgagccc
actggcccagagggcacagccaccttcacatccatcctgctgactggaggggggcccgag
gagggagaggctgtagtcttggcagaagcggagcctggcctcaccgcccaggagcaggag
gccaccctcccacccagggagaccacgcagctctcaaccacccatcgggccacaacagcc
agagccaccaccgcccaggcacctgccacctcccacccccacagggacatgcagcctggc
caccatgagacctcagctcccacaggacctggccaagccgaccctcacattcccagcgta
gaggatggagggtcctttcccaccgagacggctgctgaggatggagcctccaatcagctc
ccggcaggagagggctcaggggagcaggacttcacctttgaaacttccggggagaacaca
gtcggggtggccatcgagcctgaccaccggaatcagcccccagtggatcagggggccaca
ggggcctcgcagggcctcctggacaggaaggaggtgctgggaggggtcatcgccggaggc
ctggtggggctcatcttcgccgtgtgcctggtgggctttgtgctgtaccgcatgaagaag
aaggacgagggcagctactccctggaggagccgaagcaagccaacggcggggcctaccag
aagcccaccaagcaggaggagttctacgcctga

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