Lemur catta (Ring-tailed lemur): 123636630
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Entry
123636630 CDS
T08326
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04512
ECM-receptor interaction
lcat04514
Cell adhesion molecule (CAM) interaction
lcat04820
Cytoskeleton in muscle cells
lcat05144
Malaria
lcat05205
Proteoglycans in cancer
lcat05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123636630 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
123636630 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123636630 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
123636630 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
123636630 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
123636630 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123636630 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcat04090
]
123636630 (SDC1)
00535 Proteoglycans [BR:
lcat00535
]
123636630 (SDC1)
Membrane trafficking [BR:
lcat04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
123636630 (SDC1)
CD molecules [BR:
lcat04090
]
Proteins
123636630 (SDC1)
Proteoglycans [BR:
lcat00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
123636630 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
123636630
NCBI-ProteinID:
XP_045405046
LinkDB
All DBs
Position
4:complement(14037179..14059159)
Genome browser
AA seq
310 aa
AA seq
DB search
MKRAALCLWLCALALRLQPALPQIVATNVPPEDQDGSGDDSDNFSGSGAGAFQDSTLSQQ
TPSTWKDMWLLTTTPMAPEPTGPEGTATFTSILLTGGGPEEGEAVVLAEAEPGLTAQEQE
ATLPPRETTQLSTTHRATTARATTAQAPATSHPHRDMQPGHHETSAPTGPGQADPHIPSV
EDGGSFPTETAAEDGASNQLPAGEGSGEQDFTFETSGENTVGVAIEPDHRNQPPVDQGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFVLYRMKKKDEGSYSLEEPKQANGGAYQ
KPTKQEEFYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcggcgctctgcctctggctttgcgcgctggcgctgcgcctgcagccggcc
ctcccgcaaattgtggccacaaatgtgccccctgaagatcaggacggttctggggatgac
tctgacaacttttccggctcaggcgcaggtgcttttcaagacagcaccttgtcacagcag
accccctccacctggaaggacatgtggctcctgacaaccacgcccatggctcccgagccc
actggcccagagggcacagccaccttcacatccatcctgctgactggaggggggcccgag
gagggagaggctgtagtcttggcagaagcggagcctggcctcaccgcccaggagcaggag
gccaccctcccacccagggagaccacgcagctctcaaccacccatcgggccacaacagcc
agagccaccaccgcccaggcacctgccacctcccacccccacagggacatgcagcctggc
caccatgagacctcagctcccacaggacctggccaagccgaccctcacattcccagcgta
gaggatggagggtcctttcccaccgagacggctgctgaggatggagcctccaatcagctc
ccggcaggagagggctcaggggagcaggacttcacctttgaaacttccggggagaacaca
gtcggggtggccatcgagcctgaccaccggaatcagcccccagtggatcagggggccaca
ggggcctcgcagggcctcctggacaggaaggaggtgctgggaggggtcatcgccggaggc
ctggtggggctcatcttcgccgtgtgcctggtgggctttgtgctgtaccgcatgaagaag
aaggacgagggcagctactccctggaggagccgaagcaagccaacggcggggcctaccag
aagcccaccaagcaggaggagttctacgcctga
DBGET
integrated database retrieval system