Lemur catta (Ring-tailed lemur): 123636775
Help
Entry
123636775 CDS
T08326
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123636775 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcat04812
]
123636775 (SPAST)
Enzymes [BR:
lcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
123636775 (SPAST)
Membrane trafficking [BR:
lcat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
123636775 (SPAST)
Cytoskeleton proteins [BR:
lcat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
123636775 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
MIT
DUF815
nSTAND3
AAA_24
NPHP3_N
AAA_2
DUF4368
Motif
Other DBs
NCBI-GeneID:
123636775
NCBI-ProteinID:
XP_045405298
LinkDB
All DBs
Position
4:23463693..23522712
Genome browser
AA seq
616 aa
AA seq
DB search
MNSPGGRGKKKGSRGSSSPVPPRPPPPCLAPAPPAAGRAPARESPHKQNLYYFSYPLVVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPAPASASPPAPVPGGEAESVRAFH
KQAFEYISIALRIDEDEKAGQKDQAVEWYKKGIEELEKGIAVIITGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLPFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT
HTSNSLPRSKTVMKTGSTGLSSHHRAPSCSGLSMVSGARQGPGPAAATHKGTPKTNRTNK
PSTPTTAPRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgagggaagaagaaaggctcccgcggctccagcagcccggtg
cctcccaggcctccgcctccttgcctggcccccgcccctcccgccgccgggcgggcccct
gcgcgcgagtcgccgcataagcagaacctgtattacttctcctacccgctggttgtaggc
ttcgcgctgctgcgtttggtcgccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggcagccaagaggagctcccgggccgccccggcgccggct
tcggcctcgccccccgcgccggtgccgggcggtgaggccgagagcgtccgagccttccac
aaacaggccttcgagtacatctccattgccctgcgcatcgatgaggacgagaaagcagga
cagaaggaccaagctgtggaatggtataagaaaggtattgaagaactagaaaaaggaata
gcagtcataattacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgactaatttggttatggctaaggaccgtttacagcttctagagaagctgcaacca
gttttgccattttccaagtcacaaacggacgtctataatgatagtactaacttgacatgc
cgcaacggacatctccagtcagaaagtggagctgttccaaaaagaaaagatcccttaaca
cacactagtaattcactgcctcgttcaaaaacagttatgaaaactggatccacaggtctt
tcaagccaccacagggcacctagttgcagtggtttatccatggtttctggagcgagacag
ggacctggtcctgcagctgccactcataagggtactcctaaaacaaatagaacaaataaa
ccttctacccctacaactgctcctcgaaagaagaaagacttgaagaattttaggaatgtg
gacagcaaccttgctaaccttataatgaacgaaattgtggacaatggaacagctgttaaa
tttgatgatatagctggtcaagagttggcaaaacaagcattgcaagaaattgttattctt
ccttctctgaggcctgagttgttcacagggcttagagctcctgcaagaggattgttactc
tttggtccacctggaaatgggaagacaatgctggctaaagcagtagctgcagaatctaat
gcaaccttctttaacataagtgctgcaagcttaacttcaaaatatgtgggagaaggagag
aaattggtgagagctctttttgctgtggctcgagaacttcaaccttctataatttttata
gatgaagttgatagccttttgtgtgaaagaagagaaggggagcatgatgctagcagacgt
ctaaaaactgaatttctaatagagtttgatggtgtgcaatctgctggagatgacagagta
cttgtaatgggggcaactaacaggccgcaagaacttgatgaggctgttctcaggcgtttc
atcaaacgggtatatgtgtctttaccaaatgaggagacaagactacttttacttaaaaac
ctgttatgtaaacaaggaagcccattgacccaaaaagaactagcacaacttgctagaatg
actgatggatactcaggaagtgatctgacagctttggcaaaagatgcagcactgggtcct
atccgagaactgaaaccagaacaggtgaagaatatgtctgccagtgagatgagaaatatt
cgattatctgacttcactgaatccttgaaaaagataaaacgcagcgtgagccctcaaacc
ttagaagcgtacatacgttggaacaaggactttggagataccaccgtttga
DBGET
integrated database retrieval system
