Lemur catta (Ring-tailed lemur): 123636896
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Entry
123636896 CDS
T08326
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat01524
Platinum drug resistance
lcat03430
Mismatch repair
lcat05200
Pathways in cancer
lcat05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123636896 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123636896 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
123636896 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
123636896 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123636896 (MSH2)
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123636896 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
123636896
NCBI-ProteinID:
XP_045405509
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All DBs
Position
4:35369888..35428015
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AA seq
933 aa
AA seq
DB search
MAVQPKETLQLESAAEAGFVRFFQGMPEKPTTTVRLFDRGDFYTTHGEDALLAAREVFKT
QGVVKHMGPAGAKSLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGIKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
SDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQMNSTVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
RLDMAAVKALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQTLLLAIFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMNGLEKKMQSTLISAARDLGLEPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHASNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVYFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGESQRYDETEPAAKKCYLEREQGEKIIQEFLSKVKQVPFTEMS
EESITIKLKQLKAEVIAKNNSFVNEIISRIKVT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggccgaggccggcttcgtg
cgcttcttccagggcatgccagagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacaccacgcacggcgaggacgcgctgctggccgctcgggaggtgttcaagacc
cagggcgtggtcaagcacatggggccggccggagcaaagagtctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatctccttctggttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcatctaaggagaatgattggtatttggca
tttaaggcttctcctggcaatctatctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtattaaaatgtccacagttgatggccagagacag
gttggagttgggtatgtggattccatacagaggaagctaggactgtgtgagttccctgac
agtgatcagttctccaatcttgaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatggggaagctgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaaaagctgacttttccacaaaagacatttatcaggac
ctcaaccggttgttgaaaggtaaaaagggagaacagatgaatagtactgtcttgcccgaa
atggagaatcaggttgcggtttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaattttggacagtttgaactgactacttttgacttcagccagtacatg
agattggatatggcagctgtcaaagcccttaaccttttccagggttctgttgaagatacc
agtggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctagttaaccagtggattaaacagcctctcatggataagaacagaatagaagagagatta
aatttagtggaagcttttgtagaagatgcagagttgaggcagagtttacaagaagattta
cttcgtcgcttcccagatcttaaccgacttgctaagaaatttcaaagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttatacaggct
ctggaaaaatatgaaggaaaacaccagacattattgttggcaatttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaaccttagatatg
gaccaggtagaaaaccatgaattccttgttaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatgaatggtttggaaaagaagatgcagtcgacattaataagtgctgcc
agagatcttggcttggagcctggcaaacagattaaactggattccagtgcacagtttgga
tattactttcgtgtaacctgtaaggaagaaaaagtccttcgtaacaataaaaactttagt
acagtagatatccagaagaatggtgttaaatttaccaacagtaaattgacttctttgaat
gaagaatatacgaaaaataaaaccgagtatgaagaagcccaggatgccattgttaaagaa
attgtcaatatttcttcagggtatgtagaaccaatgcaaacactcaatgatgtgttagca
cagctagatgctgttgtcagctttgctcatgcatcaaatggagcacctgttccgtatgta
cgaccagtcattttggagaaaggacaaggaagaattatattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgtatattttgaaaaagat
aagcagatgttccacatcattactggccccaatatgggaggcaaatcaacatacattcgc
caaactggggtgatagtactcatggcccaaattgggtgttttgtaccatgcgagtcagca
gaagtgtcaattgtggactgcatcttggcccgggtaggggctggtgacagtcaattgaaa
ggagtctctacattcatggctgaaatgttggaaactgcttctatccttaggtctgcaacc
aaagattcattaataatcatagatgaattgggaagaggaacttctacctacgatggattc
gggttagcgtgggctatatcggattacattgcaacaaagattggtgctttctgcatgttt
gcaacccattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcattaaccaccgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcatgttgcagagcttgctaatttccctagacatgta
atagagtgtgctaaacaaaaagccctggaacttgaggaatttcagaatattggagaatca
caaagatatgatgaaacggaaccagcagcaaagaagtgctatctggaaagagagcaaggt
gaaaaaattattcaggagtttctatccaaggtgaaacaagtgccctttactgaaatgtcg
gaagaaagcatcactataaagttaaaacagctgaaagctgaggtgatagcaaagaataat
agttttgtaaatgaaatcatttcacgaataaaggttacttga
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