Lemur catta (Ring-tailed lemur): 123636898
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Entry
123636898 CDS
T08326
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat01524
Platinum drug resistance
lcat03430
Mismatch repair
lcat05200
Pathways in cancer
lcat05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123636898 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123636898 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
123636898 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
123636898 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123636898 (MSH6)
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123636898 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
HORMA
Arb1
WPP
Motif
Other DBs
NCBI-GeneID:
123636898
NCBI-ProteinID:
XP_045405512
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All DBs
Position
4:35667203..35689431
Genome browser
AA seq
1361 aa
AA seq
DB search
MSRQSTLYNFFPKSPALNNSNKALTRASREGGGAAAATRASPSPGGDAAWSEAGPGPRPL
VGSASPPERKNLNGGLQRSAAAAGPASSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGT
FVREKGKSVRIHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQR
ADEALNKDKVKRLELAVCDEPSEPEEEEEMEVGTTYVSDKSEEDNEIQSDEEVQPKTQGS
RRSSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGMGDSESEGFDSPVKVAR
KRKKMAGNGSLKRKSSRKEMPSATKRATGVSSETKSTLNAFSASQNSESQAHISGGGDDS
GRSTIWYHETLEWLKKEKRRDEHRRQADHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQ
NFDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYK
VARVEQTETPEMMEARCRKMAHISKHDRVVRREICRVITKGTQTYSVLEGDPSENYSKYL
LSLKEKEDSSGHTRVYGVSFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSVETKTVLKGSLSACLQEGLIPGSQFWDASKTLRTLLEEGYFREKLNEDSGVMLPQVLK
DMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDIVSTT
SPGAIFTKTNQRMVLDAVTLSNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLSA
PLCSPCAINDRLDAIEDLMAVPDKISEVVDLLKKLPDLERLLSKIHNVGSPMKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKITGIMEEVVDNFKSKILKQVITLQTKNSQG
RFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNHKDWQTAVECMAVLDVLLCLANYSRGGDGPMCRPVIL
LPGEDTVPFLKLKGSRHPCITKTFFGDDFIPNDIVIGCAEEEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQN
VAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKMNQSLRLFREVCLASERSTVDAEAVHKLLTLIKES
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagtaccctgtacaacttcttccccaagtctccggcgctgaataattca
aacaaggccctgactagggcctcacgcgaaggcggcggtgccgccgctgccaccagggcc
tccccttccccaggcggggatgcggcctggagcgaggcagggcctgggcccaggcctttg
gtgggctccgcatcgccgccagagaggaagaacctcaacggaggactgcagagatcggca
gcggctgcgggcccggccagcagttcttgtgacttctcaccaggtgatttggtttgggcc
aagatggagggttacccgtggtggccttgcctggtttataaccacccctttgatggaacg
ttcgtccgagagaaagggaaatcagtacgcattcatgtacagttttttgatgacagccca
acaaggggctgggttagcaaaaggctattaaagccatatacaggttcaaaatcaaaggaa
gcccagaagggaggtcatttttacagttcaaagcctgagatactcagagcaatgcaacgt
gcagatgaagctttaaataaagacaaggttaagaggcttgaattggcagtgtgtgatgag
ccctcagagccagaagaggaggaagagatggaggtaggcacaacttatgtatcagataag
agtgaagaagataatgaaatacagagtgatgaggaagtacagcctaagactcaaggatct
aggcgaagtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacatt
ggtggctctgatgtggaattcaagccagacgctaaggaggaaggaagcagcgatgaaata
agcagtggaatgggggatagtgagagtgaaggctttgacagccctgtcaaagttgctcga
aagcggaagaaaatggctggaaatggctctcttaaaaggaaaagttcaaggaaggaaatg
ccctcagccaccaaaagagcaaccggcgtttcatcagaaaccaagagtactttgaatgct
ttctctgcctctcaaaattctgaatctcaagcccacattagtggaggaggtgatgacagt
ggtcgctccactatctggtatcatgaaactttagagtggcttaagaaggagaagagaaga
gatgagcaccggaggcaggctgatcaccctgattttgatgcatctacactgtatgtacct
gaggattttcttaattcctgtactcctggaatgaggaagtggtggcagattaagtctcag
aactttgatctagtcatcttttataaggtggggaagttttatgaactgtaccacatggat
gctctgattggggtcaatgaactggggctggtattcatgaagggcaactgggcccattct
ggttttcctgaaattgcatttggccgttattcagattccctggtgcagaagggctataaa
gtagcacgagtggaacagactgagactccggaaatgatggaggcacggtgccgcaagatg
gcacatatatccaagcatgatagagtagtgaggagggagatctgtagggtcattaccaag
ggtacacagacctacagtgtgctggaaggtgatccctctgagaactacagtaaatatctt
cttagccttaaagaaaaagaagattcttctggccacactcgtgtgtatggtgtaagcttt
gttgatacttcactgggaaagtttttcataggtcagttttcagatgatcgccattgttcc
agatttaggactctagtggcacactatcctccagtacaagtcttgtttgagaaaggaaat
ctctcagtggaaactaagacagttctaaagggttcattatccgcttgtcttcaggaaggt
ctgataccaggctcccaattttgggatgcatccaaaactttgagaactctccttgaggaa
ggatattttagagaaaagctaaatgaggacagtggggtgatgttaccccaggtgcttaaa
gatatgacttcagagtctgattccattgggttgacaccaggagaaaagagtgaattggcc
ctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatattcctttggattctgacatagtcagtactaca
agtcctggtgctatcttcacaaaaaccaatcaacgaatggtgctagatgcagtgacttta
agcaacttggagatttttcagaatggaacaaatggttctactgaagggaccttgctagag
agggttgatacttgccatactccctttggtaagcggctgctaaagcaatggctttctgct
ccactctgtagcccttgtgctatcaatgatcgtctagatgccatagaagacctcatggct
gtgccagacaaaatctcagaagttgtagaccttctgaagaagcttccagatcttgagaga
ctactgagcaaaattcataatgttgggtctcccatgaagagtcagaaccacccagatagc
agggctataatgtatgaagaaactacatatagcaaaaaaaagattatcgattttctttct
gctttggaaggattcaaagtaatatgtaaaattacagggattatggaagaagttgttgat
aattttaagtctaaaatccttaagcaggtcattactctgcagacaaaaaattctcaaggt
cgttttcctgatttgactatagaactgaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggactgattactcccaaagcaggatttgattctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacctagagaaacagcgcagt
cgaattggctgtaggaccatagtctactggggcattggcaggaaccgttaccagttggaa
attccagagaatttcaccacccgtaatttgcccgaagagtatgagttgaaatctaccaag
aagggctgtaaacgatactggaccaaaactattgagaagaagttggccaatctgataaat
gcagaagaacggagagatgtatccttgaaggactgcatgcggcgactgttctataacttt
gacaaaaatcacaaggactggcagacagctgtagaatgtatggcagtactggatgtctta
ctgtgcctggctaactacagtcgaggaggtgatggtcctatgtgtcgcccagtaattctg
ttgccaggggaagacactgtccccttcttaaagcttaaaggatcacgccatccttgcatc
acgaagactttttttggggatgattttattcctaatgacattgtaataggctgtgcggaa
gaggaggaggaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggc
aagtctacgctcatgagacaggctggcttattagctgtaatggcccagatgggttgttat
gtacctgccgaagtatgtaggctcacaccgattgatagagtgtttactagacttggtgct
tcagatagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgctagc
atacttatgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtact
gctacgtttgatgggacagcaatagcaaatgcggttgttaaagaacttgctgagactata
aaatgtcgtacattgttctctacccactaccattcattggtagaagattattctcaaaat
gttgccgtgcgcctgggacatatggcatgcatggtggaaaatgaatgtgaagaccccagc
caggagactattaccttcctctataaattcattaaaggagcttgtcctaaaagctatggc
tttaatgcagcaaggcttgctaatcttccagaggaagttattcaaaagggacatagaaaa
gcaagagaatttgagaagatgaatcagtcactgcgattatttcgggaggtttgcctggct
agtgaaaggtcaactgtagatgctgaagctgtccataagttgctgactttgattaaggaa
tcatag
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