Lemur catta (Ring-tailed lemur): 123637705
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Entry
123637705 CDS
T08326
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03015
mRNA surveillance pathway
lcat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123637705 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
123637705 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123637705 (PABPC4L)
03041 Spliceosome [BR:
lcat03041
]
123637705 (PABPC4L)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123637705 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
123637705 (PABPC4L)
Spliceosome [BR:
lcat03041
]
Complex C
Other components
Complex C specific factors
123637705 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RBD_DEAH11
RRM_7
RRM_occluded
RRM_10
RRM_MARF1
RRM_3
RBD_RDR6
Nup35_RRM_2
AMMECR1
Motif
Other DBs
NCBI-GeneID:
123637705
NCBI-ProteinID:
XP_045406644
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All DBs
Position
5:90186261..90187405
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AA seq
370 aa
AA seq
DB search
MNVAAKYRMASLYVGDLHGDVTEDLLFKKFSTVGPVLSIRICRDAVTRRSLGYAYVNFLQ
LADAQKALDTMNFDMVKGKCIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREA
ELRNKASEFTNVYIKNFGEDMDDERLKGVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFAQLKKERLRGCQGVKLYIKNL
DDTIDDETLRREFSSFGSISRVKVMQEEGQSKGFGLICFSSPEEATKAMTEMNGRILGSK
PLSIALAQRH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggcagccaagtaccgcatggcctccctctatgtgggtgacctgcatggggat
gtcaccgaggacctgctgttcaagaagttcagcactgtggggcctgtcttgtccatccgc
atctgcagggacgcggtcacgcgccgctccctgggctatgcctacgtgaacttcttgcag
ctggctgatgctcagaaggccctggacacgatgaactttgacatggtaaaaggcaagtgc
atccgtctcatgtggtctcaacgtgacgcctacttgaggagatctggaattgggaacgtg
ttcattaagaatctggacaaatccatcgataacaaaaccctttatgaacatttttcagct
tttggaaagatcctgtcttccaaggtgatgagtgatgaccaaggctccaagggctatgca
tttgtgcactttcagaaccagagtgctgcagacagggccattgaggaaatgaatggaaag
ctgctcaaggactgcaaggtgtttgttggcagattcaaaaaccgaaaagatcgggaagcg
gaactcagaaacaaagccagtgaattcaccaatgtttacatcaaaaactttggagaagac
atggatgatgagagactaaaaggagttttcagcaaatatggcaaaaccctgagtgttaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaaaaaggcagttgaagaaatgaatggcaaggatataaatgggcagctgatt
tttgtaggccgggcacaaaagaaagtagagcgacaggctgagttaaagcaaatgtttgcg
cagctgaaaaaggaaagacttcgtgggtgccagggggtaaagctctatattaagaacctt
gatgacaccattgatgatgaaacactacgaagggaattttcttcatttggatcaattagc
agagttaaggtaatgcaagaagaaggtcaaagcaaagggtttggcttgatctgcttctcc
tctcctgaggaggctactaaagcaatgactgagatgaatggccgcatcttgggctccaaa
cccctcagcattgccctggcccagaggcactag
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