Lemur catta (Ring-tailed lemur): 123637749
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Entry
123637749 CDS
T08326
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03440
Homologous recombination
lcat03450
Non-homologous end-joining
lcat04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123637749 (RAD50)
03450 Non-homologous end-joining
123637749 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
123637749 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcat03032
]
123637749 (RAD50)
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123637749 (RAD50)
DNA replication proteins [BR:
lcat03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123637749 (RAD50)
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123637749 (RAD50)
BRCA1-C complex
123637749 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
123637749 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
123637749
NCBI-ProteinID:
XP_045406699
LinkDB
All DBs
Position
5:1054209..1126374
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSRKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVRDKERRLVDCQRELEKLNKESRLLNQEKSELLIEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFNERQIKNFHKLVRERQERETETANQLMNDFAE
KENLKQKQIDEIRDKKTGLGRIIELKSEILSKKQHELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKSSNVETLKTEVISLQNEKVDLDRTLRKLDQEMEQLNHHATARTQMEM
LTRDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLAPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLNDIKEKVKNIHSYVKD
IENYIQDGKDDYKQQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHEKLEENIENIKRNLSLALGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggattgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtttaaagtatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaggaaaccgatgtgagagcc
cagattcgtctgcagtttcgtgatgtcaatggagagcttgtagcagtgcaaagatctatg
gtgtgtactcagaaaagcagaaagacagaatttaaaacactggaaggagtcattactaga
acaaagcatggggaaaaggtcagtctaagctctaagtgtgctgaaattgaccgtgaaatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttctgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaagtttgatgagattttt
tcagcaacaagatacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactgaaatatctgaagcaaaataaggaaaaagct
tgtgagattcgtgatcagattactagtaaggaagcccagttaacatcttcaaaggaaatt
gtcaaatcctatgagaatgaacttgatccactgaagaatcgtctaaaagaaattgaacac
aatctctctaaaataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgacttatatcacaatcaccagagaacagtaagagataaagaaagg
agattggtagactgccagcgtgaattggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttattgagcagggtcgcctacagctacaagcagatcgccat
caagaacatatccgagcgagagattcattaattcagtctttggcaacacagctagaattg
gatggctttgagcgtggaccattcaatgaaagacaaattaaaaattttcacaaacttgtg
agagagagacaagaaagggaaacagaaactgccaaccagctgatgaatgactttgcagaa
aaagagaatctgaaacaaaagcagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagcatgagctgaaaaacgtg
aagtatgaattacagcagctggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctgagcaaggctgagaaaagcagcaatgtagaaacccta
aaaacggaagttataagccttcagaatgagaaagtggacctagacaggaccctgcgtaaa
ttggaccaggagatggagcagttgaaccaccatgcgacagcccgcacccagatggagatg
ctcaccagagacaaagctgacaaagatgaacaaatcagaaaaataaaatctagacacagt
gatgaattaacttcactgttggggtattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaacaatgagctaaaaagaaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggactttgaaagt
gatttagacaggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggca
ggagccacggcagtttactcccaattcatcactcagctaacagatgaaaaccagtcgtgt
tgccctgtctgtcagagagtttttcagacagaggctgagttacaagaagttatcagtgat
ttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagagctcaag
aagaaggaaaaacgacgggacgaaatgctgggacttgcacccgtgaggcaaagcataatt
gatttgaaggaaaaggaaataccagaattaagaaacaaactgcagaacgttaatagagac
atacaacgcctaaagaatgacatagaagaacaggaaacactcttgggtacaataatgcct
gaagaagaaagtgctaaagtatgtctcacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctacaaggaatagac
ttggatcgaactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaattaaatcgtaagcttatacaggaccagcaggaacagatt
caacacctcaaaagtactgcaaatgaactaaaatcagagaaacttcagatatccactaat
ttgcaacgtcgtcagcagctggaggagcagactgtggaattatccactgaagttcagtct
ttatacagagagataaaggatgctaaagagcaggtgagccctttggaaacaacattggaa
aagttccagcaggaaaaagaagaattaatcaacaaaaaaaatacaagcaataaaatagca
caggataaactgaacgatattaaagagaaggttaaaaatattcatagttatgtgaaagac
attgagaattatattcaagatgggaaagacgactataagcagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgaatgcgagaaacacaaagaaaagataaataaagaa
atgggaatcatgagacaagatattgatactcagaagatacaggaaaggtggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaaggaaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatgagaagttg
gaagagaacatagaaaatataaaaagaaatctcagtttggcattagggcgacagaaaggt
tatgaggaagaaattattcattttaagagagaacttcgagaacctcaatttcgtgatgct
gaggaaaagtatagagaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaattattcgtgacctttggcgaagcacctatcgcggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatcagcttctgataaaaggagg
aattataactaccgcgtggtgatgctgaagggagacacagccttggacatgcgaggacgg
tgcagcgcggggcagaaggtattggcctcactcatcattcgcctggccctggctgagacc
ttctgcctcaactgtggcatccttgccttggatgaacccacaaccaaccttgaccgagaa
aacatcgaatctcttgcacacgctctggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtaatcacacatgatgaagattttgtggagcttttaggacgttct
gagtatgtggagaaattctacaggattaagaagaacatcgatcagtgctcagagattgtg
aaatgcagtgttagctccctgggatcttatgttcactaa
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