Lemur catta (Ring-tailed lemur): 123637876
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Entry
123637876 CDS
T08326
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcat04515
]
123637876 (PCDHB1)
Cell adhesion molecules [BR:
lcat04515
]
Cadherins
Protocadherins
123637876 (PCDHB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ly49
PLAC8
Motif
Other DBs
NCBI-GeneID:
123637876
NCBI-ProteinID:
XP_045406973
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All DBs
Position
5:7004371..7006946
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AA seq
818 aa
AA seq
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MAVAPRKPLQSRQVGSLLIFLCISVGGATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKLHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRVE
VRVFDINDNAPIFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANAYFHL
HTRFRSHGPKYAELVLDKPLDREEQHQVNLTITAVDGGSPPKSGTAHIRVVVLDVNDHVP
QFSRLMYRTQVPENSANGSLVATVTAVDLDDGTNKDITYSLAQNPEAILQTFQIDSQSGE
VRLRGLLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS
PLQTVVALFTIRDRDIRVGGKITCFLKGDLPFVVKPTFRNSYSLVTDRGLDREAVSGYNI
TLVAMDAGPPSLSTETVIEVLISDINDNPPVFQEDSYILTVRENNSPAVFIGKVHAEDLD
LGENAQMTYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFP
SLSSQVTVKVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLFKATDLGLFSVQQQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTASLN
ILLVDGFSEPYLQFQDPSKHSRKVNPSTKYLVISLAVLSFLFLLSVTVIFVIHIYQKIKY
REKFTIQEHFYDDCNFPNNLVNGGGNGSLSRPFPHEMCSATGTGNSEFRFLKRFMPNFPF
PHATGEIKTETGSSLPPDSNRNKSRRSEGHAQVSDDYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgctcctaggaaacctttgcaaagcaggcaagtgggatctcttctcattttt
ctgtgcatatctgtggggggtgcgacaaccatccgctattcggtggcggaggagatggag
agcggctccttcgtggccaacgtggctaaggacctagggctggaggtagggaagctggct
gcgcgcggcgctcggctcgtttccgagggcaacaaactgcatttccgcctccaccgcaag
acaggggatttgttcgtgaaagagaaactggatcgggagtcactctgtggcaaagccgac
ccgtgtgttctgcactttgaaatagtcctggtggagccgctgcagtccttccgtgtcgag
gtcagggtatttgatatcaatgacaatgccccaattttcctaaacaaggagccgctttta
aagatcccggagagcacccccttgggttcacgttttcctcttcagagcgcccaggatctg
gacgtgggcctcaatggtctccaaaactacaccctgagcgccaacgcgtatttccacctg
cacacccgcttccgcagccacggacctaaatatgccgagctggtgctggataagcccctg
gatagagaggagcagcatcaagtcaacttgacgattacagctgtggacggtgggtccccg
cccaagtctggcaccgcccacattcgggtggtggttctggacgtcaacgatcacgtgccc
cagttctcgcgactgatgtaccgcactcaggtaccagagaatagcgccaatggttctttg
gtggccacggtgacagctgtggacctagatgacggcaccaacaaggatatcacttactct
ttagctcaaaacccagaagcaattctccagacgtttcagattgactctcaaagtggagag
gttcgactaagagggctcctagattttgaagctattgaaacatacgacattgacattcaa
gctaccgatggaggaggcctctccgcccacagcaaagtcctggtagaagtggtggatgtg
aacgacaatcctcctgaagtgatggtctcgtctgtgtccagccctctccctgaggactcg
ccactacagactgtcgtggcccttttcactatccgagaccgggacattcgagtgggagga
aaaattacctgtttcctcaaaggagaccttccctttgtagtcaaacctacattccggaat
tcctactcgctggtcactgacagaggcttggatcgggaggcggtctcaggctataatatc
accctcgtggccatggatgctggaccacccagcctgtccacggagactgtgatagaggtg
ctaatatctgacattaatgacaatcctccagtatttcaggaagattcctacatcttgact
gttcgagaaaacaacagccctgcggtttttattggcaaagtccatgctgaggatctagat
ttgggtgagaatgcccaaatgacatattccctgctgcctccaaaaagtggagatctatca
gtctttgcttacatctccataaattcagacaatgggaagctctatgcattgagaaccatg
gattatgaggccattcaagattttcaatttgtggtaaaggcaacagatgggggtttccca
tcactgagtagccaagttactgtcaaagttgttgttttggatgacaatgacaaccgtcca
atgatcttgtacccactgcagaatggcaccttgccctgcaatgacctggtgcccaggtct
gcggaggcaggctacctggtgaccaaagtagtggctgtggatggtgactcaggtcagaat
tcttggctttcctaccatctatttaaggccactgaccttggcttattttctgttcaacaa
caaaatggagaaattcatacattacggcagatttctgagagagaccccatgatgcagaaa
ttgatcattcttgttcaggatcatggccaaccagctctctccactactgcttcactcaac
atcctgctggtagatggcttttcagagccctacctgcagttccaggatccatccaagcat
tctagaaaggtaaatccatccactaaatatttggtcatttctctggctgtgctttccttc
ctctttctcctctctgtcacagtgatctttgttatacacatctaccaaaagattaaatat
agagaaaagttcacaattcaagagcatttctatgatgactgtaatttccctaacaacctg
gtaaacggaggaggcaatggatccttatcccggccttttccacatgaaatgtgttcagcc
accggcactggcaatagtgagttccggtttcttaagcgctttatgcccaacttccctttc
cctcatgccactggagagataaaaacagagactggctccagtttacctccagattctaat
agaaataagtctcggagatcagagggacatgcccaggtatctgatgactatatgtag
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