Lemur catta (Ring-tailed lemur): 123638535
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Entry
123638535 CDS
T08326
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123638535 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123638535 (SMARCA5)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123638535 (SMARCA5)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
123638535 (SMARCA5)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
123638535 (SMARCA5)
RSF complex
123638535 (SMARCA5)
WICH complex
123638535 (SMARCA5)
B-WICH complex
123638535 (SMARCA5)
NORC complex
123638535 (SMARCA5)
BRF complex
123638535 (SMARCA5)
NuRF complex (fruit fly)
123638535 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
123638535
NCBI-ProteinID:
XP_045408158
LinkDB
All DBs
Position
5:complement(83758925..83799976)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAAEPPPPPPSESAPSKPGASAASGGSNSSNKGGPEGVAAQAAPSAATAGPADGEMEE
VFDDASPGKQKELQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPELPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgctgccgagcctccgccacccccgccttccgagagcgcgccttccaagccc
ggagcctcggccgccagcggcgggagcaacagcagcaacaaaggcggccccgagggcgtc
gcggcccaggcggctccgtctgcagccacggccggtcccgcggacggcgagatggaggaa
gtatttgatgatgcatcacctggcaagcaaaaggaactccaagaaccagatcctacctat
gaagaaaaaatgcaaactgaccgagcaaatagattcgagtatttattaaagcagacagaa
ctgtttgcgcatttcattcagcctgctgctcagaagactccaacttcacctttgaaaatg
aaaccggggcgcccacgaataaaaaaggatgagaaacagaacttgctatcagttggagac
tatcgacaccgtagaacagagcaagaggaggatgaagaactactaacagaaagttccaaa
gcaaccaatgtttgcactcgttttgaagactctccatcatatgtaaaatggggtaaactg
agagattatcaggtccgaggattaaattggctcatttctttatatgagaatggcatcaat
ggtatccttgcagatgaaatgggcctggggaagactcttcaaacaatttctcttcttgga
tacatgaaacactatagaaacattcctggtcctcatatggttttggtccctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgtttg
ataggagataaagaacaaagagctgcttttgtcagagacgttttattaccaggagaatgg
gatgtatgtgtaacatcttatgaaatgcttattaaagagaagtctgtgttcaaaaaattt
aattggagatacttagtaatagatgaagctcacaggatcaaaaatgaaaaatctaagtta
tcagaaatagtgagggaattcaagactacaaatcgacttttattaactggaacgcctctt
cagaacaacttgcatgagctatggtcacttcttaattttttgttgccagatgtatttaat
tcagctgatgactttgattcctggtttgatacaaacaactgccttggggatcaaaaacta
gttgagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaggctgatgtt
gaaaagagtttgcctccaaagaaggaagtaaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatacccggatactaatgaaggatatagatatactaaactcagcagggaag
atggacaaaatgaggttgttgaacatcctgatgcagttgagaaaatgttgtaatcatcca
tatctctttgatggagctgaacctggtccgccttacacgacagacatgcatctagttacc
aacagtggcaagatggtggtattagacaagctactccctaaattaaaagaacaaggttct
cgagtactaatctttagccagatgacaagggtattggacattttggaagattattgcatg
tggagaaattatgagtactgcaggttggatgggcagacacctcatgatgagagacaagaa
tccatcaatgcatacaatgaaccaaacagcacaaagtttgtttttatgttaagcacacgt
gctggtggtcttggcatcaatcttgctactgctgacgtagtaatcttgtatgattcagat
tggaatccccaagtagatcttcaggctatggaccgagcgcatagaattggacaaaccaag
acagtcagagtgttccgctttataactgataacaccgtagaagaaagaatagtagaacgt
gctgagatgaaactcagactggattcaatagtcattcaacaagggaggcttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgattcgacatggggcaacacat
gtatttgcctcaaaggaaagtgagatcactgatgaggatattgatggtattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagaatcaagtgtttataactttgaaggagaagactataga
gaaaaacaaaagattgcattcacagagtggattgaaccacctaaacgagaaagaaaagcc
aactatgctgttgatgcatatttcagggaggctcttcgtgttagtgaacctaaagcaccc
aaggcacctcgacctccaaaacaacccaatgttcaggatttccagttctttcctccacgt
ttatttgaattactggaaaaagaaattctgtattacagaaaaactattgggtacaaggta
cctcgaaatcctgagctacctaatgcagcgcaggcacaaaaagaagaacaacttaaaatt
gatgaagctgaaccccttaatgatgaagaattggaggaaaaagagaagcttctaacacag
ggatttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaagtgg
ggtcgtgatgacattgaaaatatagcaagagaagtagaagggaagactccagaagaagtc
attgaatattcagctgtgttctgggaaaggtgcaatgagctccaggatatagagaagatc
atggctcagattgaaaggggagaggcgagaattcaaagaagaataagtatcaagaaagca
ctcgacaccaagattggacggtacaaagcaccttttcatcagctgagaatatcatatggt
actaacaaaggaaaaaactatactgaagaagaggatcgttttctgatttgtatgcttcac
aaacttggatttgacaaggaaaatgtttatgatgaattgcgacagtgtattcgcaactct
cctcagttcagatttgactggtttcttaagtctagaacagcaatggagctccagaggagg
tgtaataccttaattaccttgattgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaaacgaggaccaaagccttcaacacagaaacgtaaaatggatggagca
cctgatggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
