Lemur catta (Ring-tailed lemur): 123638569
Help
Entry
123638569 CDS
T08326
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcat04515
]
123638569 (PCDH18)
Cell adhesion molecules [BR:
lcat04515
]
Cadherins
Protocadherins
123638569 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
TMEM154
Cadherin_C_2
MPS-4
PAH
DUF3418
Motif
Other DBs
NCBI-GeneID:
123638569
NCBI-ProteinID:
XP_045408233
LinkDB
All DBs
Position
5:88039522..88052258
Genome browser
AA seq
1135 aa
AA seq
DB search
MRQMNPKMHFRFVFALLTVSFNHVALGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPN
PSSVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEVSYIFEGDPIDTFVALVGVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYGLTVIAEDKGTPSLSTVKHFTVQINDINDNPPQFQRSRYEFVISENNSP
GAYITTVTATDPDLGENGLVTYTILEGFILGRSITTYVTIDPSNGAIYALTIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPVLRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSIIGGNEENIFTIDPRSCDIHTNVSMESVLSTEWELLVIIQD
KGNPQLHTKVLLKCAIFEYAESVTSTAMTSVSQASWDFSMMIIISLGAICALLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMSSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHQSLEDDTQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPSL
DAYSECSEMDRSNSLERRKGPLPAKPGGYPQGVAAWAASTHFQNPTNTPGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaatgaatcctaaaatgcactttagatttgtttttgcactcctgacggtgtct
ttcaaccacgttgcattgggcaagaatttgaaatacaggatttatgaggaacagagggtt
ggatcggtcattgcaagactatcagaggatgtggctgatgttttattgaagctgcctaat
ccttcttctgttcgttttcgagccatgcaaaggggaaattctcctctacttgtagtaaac
gaggataatggggaaatcagcataggagctacaattgaccgtgaacaactatgccagaaa
aacttgaactgttctatagagtttgatgtgatcactttacccacagagcatctgcagctt
ttccatattgaagttgaagtgctggatattaatgacaattctccccagttttcaagatct
ctcatacctattgagatatctgagagtgcggcagttgggactcgtatccccctggacagt
gcatttgatccagatgttggagaaaattccctccacacatactccctctctgccaatgat
ttttttaatatcgaggttcggaccaggactgatggagccaagtacgcagaactcatagtg
gtcagagagttggatcgggagctgaagtcaagctatgagcttcagctcactgcctcagac
atgggggtgcctcagaggtccggctcatccatcctaaaaataagcatttcggactccaac
gacaacagccctgcctttgagcagcagtcttatataatacaactcttagaaaactcccct
gttggcactttgctcctagatctgaatgccactgatccagatgagggcgccaatgggaaa
attgtatattccttcagcagtcatgtgtctcctaaaattatagagacttttaaaattgat
tcagaaagaggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctat
gagattgatgttcaagctcaagatttgggtccgaattcgatcccagctcattgcaaaatt
ataattaaggttgtggatgttaatgacaacaaacctgaaattaacatcaacctcatgtcc
cctggaaaagaagaagtatcttatatttttgaaggggatcctattgacacatttgtggct
ttggttggggttcaggacaaggattctgggctgaatggagaaatagtttgtaagcttcat
ggacatggtcactttaaacttcagaagacttatgaaaacaattatttaatcttgactaat
gccacactggatagagaaaagagatctgaatatggtttgactgtaattgctgaggacaag
gggacacccagtctctctacagtgaaacattttactgttcaaatcaatgatataaatgac
aatccaccccaattccagagaagccgatatgaatttgtaatctcggagaataactcgcct
ggggcatatattaccactgttacagccacagatcctgatcttggagaaaatgggctagtg
acatataccattctggagggttttatcctaggaaggtccataactacatatgtaaccatt
gacccatccaatggagccatctatgccctcacaatctttgaccatgaagaagtgagtcag
atcacttttgtggtagaagcaagagatggaggaagtccgaagcaacttgtaagcaatacc
acagttgtactcaccatcattgatgaaaatgataatgtccctgtggttatagggcctgta
ctgagaaataataccgcagaaatctccatccccaaaggggctgaaagtggctttcatgtc
acaagaataagggcaattgacagagactctggtgtgaatgctgaactcagctgctccata
ataggaggtaatgaggaaaatatcttcacaattgatccacgatcatgtgacatccatacc
aatgtgagcatggaatctgttctctccacagaatgggagcttttggttattattcaggac
aaaggcaatcctcagctgcataccaaagtccttctgaagtgcgcgatctttgaatatgca
gagtcagtgaccagtacagcaatgacttcagtaagccaggcatcctgggatttctccatg
atgataattatttccttaggagcaatctgtgcactgttgttggttatcatggttctattt
gcaactaggtgtaaccgagaaaagaaagatactagatcctacaactgcagggtggcagaa
tcaacttaccagcaccacccaaaaaggccatccaggcagattcacaaaggggacatcaca
ttggtgcctaccattaatggcactctgcccatcagatctcatcacagatcatctccatct
tcatctcctaccttagaaagagggcaaatgagcagccggcagagtcacaacagtcaccag
tcactcaacagtttggtaacaatctcatcaaaccacgtgccggagaatttctcattggaa
ctcacccacgccactcctgctgttgagcaggtctcccagcttctttcgatgcttcaccag
gggcaatatcagccaaggccaagttttcgaggaaacaaatattccaggagctatagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagca
ggagacagtgattatgatttgggacgagattctcctatagataggctgctgggtgaagga
ttcagcgacctgtttcttacagatgggaggattccagcagctatgaggctctgcacagag
gagtgcagagtcctgggacactctgaccagtgctggatgccaccgctgccctcaccgtcc
tctgattataggagtaacatgttcattccgggggaagaattcccggcacaaccccagcag
cagcatccgcatcagagtctcgaggatgacacccagcctgcagattctggtgagaagaag
aagagtttttccacgtttgggaaggactctccaaacgatgaggacacgggggacaccagc
acatcctctctgctctcggaaatgagcagcgtgttccagcgcctcctacccccttccctg
gacgcctactccgagtgcagcgagatggatcggtccaactccctggaacgcaggaaggga
cccttgcccgccaaacccgggggttacccgcaaggggtggcggcctgggcagccagtaca
cattttcaaaatcccaccaacacccccgggcccccacttggaacccactccagtgtgcag
ccttcttcaaagtggctgccagccatggaggagatccctgaaaactatgaagaagatgat
tttgacaatgtgctcaaccacctcagtgatgggaaacacgaactcatggatgccagtgag
ctagtggctgagattaacaaactgcttcaagacgtccgccagagctag
DBGET
integrated database retrieval system