Lemur catta (Ring-tailed lemur): 123638885
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Entry
123638885 CDS
T08326
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123638885 (SOX30)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123638885 (SOX30)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
123638885
NCBI-ProteinID:
XP_045408644
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Position
5:24973965..24997913
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AA seq
768 aa
AA seq
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MERARPEPRPQPRQLPRVTPPCPLRPAPPPLPVEGSSFRAAAVEPPQSPPAPCAAAIATL
ASSCGDAPASGVQPVARRLLQVKPEQVLLLPPVPPLPQARDDSAVSSPAQARLVSLRPEL
LLLPPPPAPEGAPCRPELYPVQPRELHVKVERQEPGPGCDPSGVGPRRAVEAGSRVSRAA
KVEGPGPPLDSRRGDTKKGKLETEEIMRDAGKGSEGKNLATVREEIIKTEKPERFREDCR
LGTEPASNGLVHGSKEVILAQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLENTITHPVGEA
PPAIQLPTPAVQRPSPITLFQPSISSTGQVAVQAPSLPLHPALPPQRFAGPSQMDTDRLH
SGASHSVKRPTLVSLESTNRIPTSASTAHARFATSTIQPPKEYSSVSTCPRSAPIPQAPP
LPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPEERTHSEDSRSCESMDGTPYYNSHGHSGE
EYLNPMPPLDIGALENVFTAPTSTPPSIQQVNVTDSDEEEEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccagagccgcgacctcagccgcgccaactgccacgggtgaccccg
ccgtgtccgctacgacccgctccgcccccgctgccggtcgaaggctcctcttttcgggca
gcggccgtcgagccacctcagtcgccgcccgccccgtgcgcagccgccatcgcgaccctg
gcctcgtcgtgcggcgacgccccggcgtcgggcgtacagcccgtggcacggcggctgctg
caggtgaaaccggaacaggtattgttgctgcctccagtgccaccactgccccaggcccgg
gacgacagcgccgtttcctcgcccgcgcaggcgcggctagtgtcgctgaggccagagctg
ctgctgctgccgccaccgcccgcacccgagggcgccccctgcaggcccgagttgtacccg
gtgcagccccgggaactgcacgttaaggtcgagaggcaggagccaggtcccggctgcgac
ccgtcgggagtggggcctcggagggccgtcgaagcgggctccagagtctccagggcggcc
aaggtggaaggcccagggccgcccctcgacagccgccgcggggacacgaagaagggcaag
ctggagacagaggagatcatgagggacgcggggaaaggcagcgaaggcaaaaacctggcg
actgtccgagaagaaatcatcaaaacggagaagcccgagagattccgcgaggactgcagg
ctgggcacggagcccgcgtccaatggcctggttcatggcagcaaggaggtcatcttggcc
cagccgtccagcgccttcgggccacaccagcaagacctcaggatccctttgactctccac
accgtacccccgggggcccggatccaatttcagggacctccaccttcagagctgataaga
ttgaccaaggttcccctgacaccagtgcctattaaaatgcaatccttactggagccttct
gtaaaaattgaaaccaaagatgtcccactgaccgtgcttccctcagacgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggatccaccggccagcactagccaaagctaacccagcagccaacaatgca
gaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccc
tattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtt
tatcagcctcgtccagggaagcgaaaacgctttcctctaagtgtttccaatgtattttct
ggtaccacacagaatatcatctctacaaatcccacaacaatttatccttatcgctcacct
acctactctgtggtaattcccagcctagagaacaccattactcatccagttggtgaagcc
ccacctgccatccagctgcccacacctgcagtccagcgcccaagccccatcacacttttc
cagcccagcatctccagtactggccaggtggctgtccaggctcctagtctgcccctccac
ccagcactcccaccccagcgttttgctgggccttcccaaatggacactgatcggctgcat
tctggagccagtcactctgtgaagagaccaacccttgtctctctggagagcaccaacagg
attccaaccagtgcaagtactgcccatgccagatttgcaacctcgaccatccagcctcct
aaggaatattccagcgtttccacttgtcccagaagtgctccaattccccaggctcctccc
cttccacactcgcatgtctaccagcctcctccccttggccatccagccactctgtttggg
acaccaccgagattctcttttcatcacccttactttctacctggacctcactacttccca
tcaagcacatgcccttatagtcggcctccctttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaggacaggtaccaaaaacatgaagctatgttttcagct
ttaaacagagactatccttttagagattacccagaggaacgcacacacagcgaagattct
cggagttgtgagagcatggatgggaccccttactataacagtcacggccacagtggggaa
gagtacttaaaccccatgcctccgctggacatcggagccttggagaatgtcttcacagcc
ccaacgtcaactccccctagcatccagcaagtcaacgtcactgacagtgatgaggaggaa
gaagaaaaagtgctcaggaatttataa
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