Lemur catta (Ring-tailed lemur): 123638902
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Entry
123638902 CDS
T08326
Symbol
SLC6A1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04082
Neuroactive ligand signaling
lcat04721
Synaptic vesicle cycle
lcat04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123638902 (SLC6A1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
123638902 (SLC6A1)
04721 Synaptic vesicle cycle
123638902 (SLC6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcat02000
]
123638902 (SLC6A1)
Transporters [BR:
lcat02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123638902 (SLC6A1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123638902
NCBI-ProteinID:
XP_045408671
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Position
5:complement(33334558..33350532)
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AA seq
599 aa
AA seq
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MATNGSKVADGQISTEVSEAPVANDKPKTLVVKVQKKAGDLPDRDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNYSIV
NTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVV
YFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGL
GSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASG
PGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRR
ELFIAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRF
YDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWLM
ALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDIVRPENGPEQPQASGSASKEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacggcagcaaggtggccgatgggcagatctccacggaggtcagcgaggcc
cccgtggccaatgacaagcccaaaaccctggtggtcaaggtgcagaagaaggcgggggac
cttcctgaccgggacacgtggaagggccgcttcgacttcctcatgtcttgcgtgggctat
gccatcggcctgggcaacgtctggaggttcccctacctctgcgggaaaaacggcggcgga
gccttcctcatcccctacttcctgacgctcatctttgcgggggtcccactcttcctgctg
gagtgctccctgggccagtacacgtccatcggggggctgggggtgtggaagctggccccc
atgttcaagggcgtgggcctcgcggctgccgtgctgtcattctggctcaacatctactac
atcgtcatcatctcctgggccatctactacctgtacaactccttcaccacgacactccca
tggaaacaatgtgacaacccctggaacacagaccgctgcttctccaactacagcattgtc
aacaccaccaacatgaccagtgccgtggtggagttctgggagcgcaacatgcaccagatg
accgacgggctggataagccaggtcagatccgctggccgctggccatcacgctggccatc
gcctggatccttgtgtatttctgtatctggaaaggagttggctggactggaaaggtggtc
tacttctctgccacatacccctacatcatgctgatcatcctgttcttccgcggagtgacg
ctgcccggggccaaggagggcatcctcttctacattacgcccaacttccgaaagctgtcc
gactccgaggtgtggctggatgcggctacccagatcttcttctcctacgggctgggcctg
ggatccctgatcgccctcgggagctacaactctttccacaacaatgtctacagggactcc
atcatcgtctgctgcatcaattcctgcaccagcatgtttgcgggattcgtcatcttctcc
atcgtgggcttcatggcccatgtcaccaagcggtccattgctgatgtggcggcttcaggc
ccggggctggcgttcctggcatacccggaggcggtgacccagctgcccatctctcccctc
tgggccatcctcttcttctcgatgctgctgatgttgggcattgacagccagttctgcacc
gtggagggcttcatcacggccctggtggacgagtaccccagactcctccgcaaccgccgg
gagctcttcattgctgccgtctgcatcatctcctacctgatcggcctctctaacatcacc
caggggggcatttatgtcttcaagctttttgattactactctgccagtggcatgagcctg
ctgttcctcgtgttctttgaatgtgtctctatttcctggttttacggtgtcaaccgattc
tacgacaatatccaagagatggttggctccaggccctgcatctggtggaaactctgctgg
tctttcttcaccccaatcatcgtggcgggcgtgttcattttcagtgccgtgcagatgact
cctctcaccatgggaagctacgttttccccaagtgggggcagggcgtgggctggctcatg
gctctgtcttccatggtcctcatcccagggtacatggcctacatgttcctcaccttaaag
ggctccctgaagcagcgcatccaggtcatgatccagcccagcgaagacatcgttcgcccg
gagaacgggccggagcagccgcaggccagcggctcggccagcaaggaggcctacatctag
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