Lemur catta (Ring-tailed lemur): 123639927
Help
Entry
123639927 CDS
T08326
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123639927 (SOX5)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123639927 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
123639927
NCBI-ProteinID:
XP_045410158
LinkDB
All DBs
Position
6:78638638..79066071
Genome browser
AA seq
763 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKIMSSFAPHNSSTSPQKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI
PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
RINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQALDGK
VAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aaacctcactctgaggaatttcagccagtttctctgctgacgcaagagacttgtggccat
aggactcccacttctcagcacaatacaatggaagttgatggcaataaaattatgtcttca
tttgccccacacaactcatctacctcacctcagaaggcagaagaaggtgggcgacagagt
ggtgagtccttgtctagtacagccctgggaactcctgagcggcgcaaaggcagcttagct
gatgttgttgacaccttgaagcagagaaaaatggaagagctcatcaaaaatgagccagaa
gaaacccccagtattgaaaagctactctcaaaggactggaaagacaagcttcttgcaatg
ggatcagggaactttggcgaaataaaagggactcccgagagcctagctgagaaagagagg
caactcatgggtatgatcaatcagctgaccagtctgcgagagcaactgttggctgcccac
gatgagcagaagaagctagctgcatctcagattgagaaacagcgccagcaaatggagctg
gccaagcagcaacaagaacagattgcaagacaacagcagcagcttctgcagcaacaacac
aaaatcaatttgctccagcaacagatccaggttcaaggtcagctgccgccattaatgatt
cctgtattccctcctgatcaacggacgctggctgcagctgcccagcaaggattcctcctt
cctccaggcttcagctataaggctggatgtagtgacccttaccctgttcagctgatccca
actaccatggcagctgctgccgcagcaacaccgggcttaggcccactccaactgcagcag
ttatatgctgcccagctagctgcaatgcaggtatctccaggagggaagctcccaggcata
ccccaaggcaaccttggtgctgctgtatctcctaccagcattcacacagacaagagcaca
aacagcccaccacccaaaagcaaggatgaagtggcacagccactgaacctatcagctaaa
cccaagacctctgatggcaaatcacccacatcacccacctctccccatatgccagctctg
agaataaacagtggggcaggccccctcaaagcctctgtcccagcagcgttagctagtcct
tcagccagagttagcacaataggttatttaaatgaccatgatgctgtcaccaaggcaatc
caagaagctcggcagatgaaggagcaacttcggcgggaacaacaggcgctggatgggaag
gtagctgttgtgaacagtctgggtctcaataactgccggacagaaaaggaaaaaacaaca
ctggagagtctgactcagcaactggcagttaaacagaatgaagaaggaaaatttagccat
gcaatgatggatttcaatctgagtggagattctgatggaagtgctggagtctcagagtca
agaatttatagggaatccagggggcgtggtagcaatgaaccccatataaagcgtccaatg
aatgccttcatggtgtgggctaaagatgaacggaggaaaatccttcaagcctttcctgac
atgcacaactccaacatcagcaagatattgggatctcgctggaaagctatgacaaaccta
gagaaacagccatattatgaggagcaagcccgtctcagcaagcagcacctggagaagtat
cctgactacaagtacaagcccaggccgaagcgcacgtgcctcgtggatggcaaaaagctg
cgcatcggtgaatacaaggcaatcatgcggaacaggaggcaggaaatgcggcaatacttc
aatgtcgggcaacaagcacagatccccatcgccactgctggtgttgtgtaccctggagcc
atcgccatggctgggatgccctcgcctcacctgccctcagagcactcaagcgtgtctagc
agcccagagcctgggatgcctgttattcagagcacttatggcgtaaaaggagaggagcca
catatcaaagaagaaatacaggctgaggacatcaacggagaaatttatgatgagtacgat
gaggaagaggatgatccggatgtagattatgggagtgacagtgaaaaccatattgcagga
caagccaactga
DBGET
integrated database retrieval system
