Lemur catta (Ring-tailed lemur): 123640387
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Entry
123640387 CDS
T08326
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03082
ATP-dependent chromatin remodeling
lcat04714
Thermogenesis
lcat05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123640387 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123640387 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123640387 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123640387 (SMARCD1)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123640387 (SMARCD1)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123640387 (SMARCD1)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123640387 (SMARCD1)
PBAF complex
123640387 (SMARCD1)
GBAF(ncBAF) complex
123640387 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
123640387
NCBI-ProteinID:
XP_045410906
LinkDB
All DBs
Position
6:complement(57871797..57884610)
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggctggttttcagtctgtggctcccagcggcggcgccggagcctctggt
ggagcgggcgcggcggctgcactgggcccgggcggaactccggggcctcccgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccaatcccgc
aagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcgtatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccaccaaacaaaagaggaagttctcttccttttttaagtccttg
gtgatcgaactggacaaagacctatatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagactgatggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtactgttctactgatgctggattaccagcctccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccacacccagacccgtcccgtgatcatccaagcattgtgg
caatatattaagacacataagctccaggaccctcatgagcgggagtttgtcatctgtgac
aaatacctccagcagatatttgagtctcaacgtatgaagttttcagagattcctcaacga
ctccatgccttgcttatgccaccagaacctatcatcattaatcatgtcatcagtgttgac
ccaaatgatcagaaaaagacagcttgttatgacattgatgtggaagtggacgatactttg
aagacccagatgaattcttttctgctgtccactgccagccaacaagagattgctactctg
gacaacaagatccatgagacaatagaaactatcaaccagctgaagacccagcgggaattt
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcccagtgc
cgggacctcaagacaatgactgacgtggtgggtaacccggaggaagagcgccgagctgag
ttctacttccagccttgggctcaggaggctgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccctgggaatccgaaatacatag
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