Lemur catta (Ring-tailed lemur): 123641091
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Entry
123641091 CDS
T08326
Symbol
XNDC1N
Name
(RefSeq) LOW QUALITY PROTEIN: putative short transient receptor potential channel 2-like protein
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcat04040
]
123641091 (XNDC1N)
Ion channels [BR:
lcat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123641091 (XNDC1N)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
YVC1_C
Ank
Motif
Other DBs
NCBI-GeneID:
123641091
NCBI-ProteinID:
XP_045411532
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All DBs
Position
7:60097693..60137255
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AA seq
1259 aa
AA seq
DB search
MAPVKISHVVSFSSQDPKYPVENLLNPDSQRRPWLSCPRDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWSLDRPFVTLLPATMLMSLADSKQGKNCSGVRMFKADDFLAP
ASEESWDRLRLTCSQPFTRHQSFGLSFLRVRSSLDSLDDPVMGLSTPASSGLSQGSSDVQ
ESGPSPWLANPSIRRTFFPDPQTNTKKISELRNILTQLQPGGLGRSARMVLSATLRTPAS
MASLKNNHAEPGTSRPDSTEPRAEEQNSKNDVGRMKRQKVHDQRPPSNSNSQPDRRGTAR
TWQRKHHRPRAQSSGGQYSGQCPICAGFFSIESLPLHAATCGETSSLPYSSLSSPESSPP
ISWVQRFLCVALTXVPLVPRPQPNWTEIVNKKLKFPPPLLGAIQEGRLGLVQQLLESGGE
ATSSGSGGPLRNVEEAEDRSWREALNLAIRLGHEAITDVLLANVKFDFRQIHEALLVAVD
TNQPAAVRRLLARLEREKGRKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIA
QLLMDQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAML
AAFQLSRELRRLARKEPEFKPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDLGEDSET
EAEGLGQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWKL
FVAFLIFLTMPFLCLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLVMETQ
LSTFRGRSQSVWETSLHMVWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLAAF
ALRLLLAGLAHMHCRVASNGAACQYFTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAY
ILPAHESLGTLQISIGKMIDDMMRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNETF
QFLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIED
DADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAVFYLLRRIFQFTCCCCSCCKTKRP
DYPPIPAFANPGAGAGPGEGERGSYRLRVIKALVQRYIETARREFEETRRKDLGNRLTEL
TKTVSRLQSEVASMRRTLVDGGTPRPPDGASILSRYITRVRNSFQNLAPPIPETPELTVP
GIVGTPVPSETGQQDPGGAPASGQSGPSSPAPVLVHREQEAQGDRDLPQEEDLGTNGGS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgtgaaaatcagccacgtggtatcattttcctctcaggatcccaagtatcct
gtagagaacttgctgaaccccgacagtcagaggagaccttggctcagctgccctcgggac
aagagtgggcaactgaaagtggagctacagctggagagggcagtgcccattggctacatt
gatgtgggtaactgtggctgtgctttcctgcaaatagatgtgggccgttcttcttggtcc
ttggacagacctttcgtcaccctgcttcctgcaaccatgctgatgtccctagctgactca
aagcagggcaagaactgctcaggggtccgcatgtttaaagctgatgattttctggctcca
gcctcggaagagtcatgggatcgacttcgccttacctgctcccaacccttcacacgccat
cagtcctttggcctgtcctttctgcgggtgcgttcctctctagactccttagatgaccca
gtgatgggtctctcaacccctgcgagctctggcctgagccagggatcctctgatgttcag
gagtctggtcccagcccctggttggctaatccttccatccggaggacattcttcccagat
ccccagacgaacaccaagaaaatttcagagctcaggaacatattaacgcagctgcagcca
gggggtctggggcgttcagcccgcatggtgctttcggctaccctccggacaccagccagc
atggcaagcctgaagaacaaccatgcagaaccaggtactagtcgtccagatagcacagag
cccagagcagaggagcaaaactccaagaacgatgtgggcaggatgaaaagacagaaagtg
catgaccaaaggcctccatccaactctaactctcagccagacaggagggggacagcaagg
acatggcaaagaaaacaccaccgaccccgggcccaaagcagtggtggccagtatagtggc
cagtgccccatctgtgctggcttcttcagcattgagagtcttcccctgcacgctgccact
tgtggagagacctcctcattgccatattcgtccctgtcttccccagaaagttctccaccc
atttcctgggtccaaagatttctttgtgtggcactaacataagttcccctggtccccagg
ccacagcctaactggactgaaatcgtgaacaaaaagctcaagttcccacctccactcctg
ggtgccatccaggagggccgactgggtctcgtgcagcagctgctggaatcagggggtgag
gccacgagcagcgggtcaggcgggcccctgcggaatgtggaggaggctgaggaccgctcc
tggagggaagctctcaacctggccatccgcctgggccacgaggccatcactgatgtgctg
ttggccaatgtcaagtttgacttccgacagatccatgaggccctgctagtggcggtggac
acaaaccagccagcagcagtgcgtcgcctactggcccggctggaacgggagaagggtcgc
aaagtagacactaggtctttctcattggctttctttgactcatcgattgatggttcccgc
tttgcacccggtgtcactccactcaccctggcctgccagaaggacttgtatgagatcgca
cagctgctcatggaccagggccacaccattgcccggccccacccagtctcctgtgcctgc
cttgagtgcagcaacgcccgccgctatgacctgctgaagttctccctgtcccgcatcaac
acctaccgtggcattgccagcagggcccacctctcgctagccagtgaggatgcaatgctg
gctgccttccagctcagccgcgagctcaggcgccttgcacgcaaggaacctgagtttaag
cctgaatacattgccctggagtcgctgagccaggactatggctttgagctgctgggcatg
tgccggaaccagagcgaggtcactgcggtgctcaacgacctgggagaggacagcgagact
gaggctgagggcctcgggcaggcctttgaagaaggcatccccaacctggcgcggctgcga
ctagccgtcaactacaaccaaaagcggtttgtagcacaccccatctgccagcaagttctg
tcctccatctggtgcgggaacctggccggctggcgtggaagcaccaccatctggaagctc
tttgttgccttcctcatcttcctcaccatgcccttcctctgccttggctactggctggcg
cccaagtcccggctgggccgcctgctcaagatcccggtgctgaagttcctgctgcactca
gcctcctatctgtggttcctcatcttcctgctgggagagtccctggtcatggagacgcag
ctaagcaccttccgtggccgcagccagagtgtctgggagacttctctgcacatggtttgg
gtcacaggcttcctgtggtttgagtgcaaggaagtgtggatcgagggcctgcgcagctac
ctcctggactggtggaacttcctggatgtggtcatcctgtccctgtacctggcggccttc
gcactgcgcctcctcctggctggccttgcccacatgcactgccgggttgcctccaatggg
gctgcctgccagtatttcaccacagctgagcgaagtgagtggcgcaccgaggatccccag
ttcttggccgaggtgctcttcgctgtcaccagcatgctcagcttcacccgcctggcctac
attctgccggcccacgagtcactgggcactctgcagatttccattggcaagatgatcgac
gacatgatgcggttcatgttcatcctcatgatcatcctgaccgccttcctctgtggcctc
aacaacatttatgtgccctaccaggagacagagcggctgggcaatttcaacgagacattc
cagtttctgttctggaccatgtttggcatggaggagcacagcgtggtagacatgcctcag
tttctggtgcctgaattcgtgggccgggccctctatggcatcttcaccatcgtcatggtt
attgtgctgctcaacatgctcatcgccatgatcaccaactccttccagaagattgaggat
gatgccgatgtggagtggaagtttgctcgctccaagctctacttgtcctacttccgagag
ggcctgaccctgcctgtgcccttcaacatcctgccctctcccaaggctgtcttctacctt
ctcaggaggattttccagttcacttgctgttgctgctcctgctgcaaaaccaagaggcca
gactatcccccgatcccggccttcgccaatcccggggcaggggcagggcctggggaggga
gagcgtggatcctaccgccttcgtgtcatcaaggctctggtacagcgctacatagagact
gcccggcgcgagttcgaggagacgcgtaggaaagacctgggcaacagactgacagagctg
accaagaccgtatctcgactgcaaagtgaggtggccagcatgcggcggactctggtggac
ggagggacaccccggcctcccgacggtgccagcatcctcagtcgctatatcacccgagta
cgcaacagcttccagaacctggccccccccatccctgagaccccagagctgacagtgcca
gggattgtggggaccccggtaccttcagaaactgggcaacaggaccctggaggggctcca
gcttctgggcagtctggcccctcctccccagctcctgtgctggtgcatagggaacaggaa
gcacagggggatagggatctgccccaggaggaggatttggggaccaacggggggtcctga
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