Lemur catta (Ring-tailed lemur): 123641117
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Entry
123641117 CDS
T08326
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03040
Spliceosome
lcat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123641117
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123641117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcat03041
]
123641117
04121 Ubiquitin system [BR:
lcat04121
]
123641117
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123641117
Enzymes [BR:
lcat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123641117
Spliceosome [BR:
lcat03041
]
Complex B
Other components
Prp19 complex
123641117
Complex C
Prp19-CDC5 complex
123641117
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
U-box type E3
123641117
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
123641117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_Aladin
NBCH_WD40
PAC11
CFAP251_N
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
WD40_RFWD3
ASA1
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
PROPPIN
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_DCAF12
U-box
Peripla_BP_2
Beta-prop_LRRK2
CCDC13
ATG16
Cep57_MT_bd
GP3
Motif
Other DBs
NCBI-GeneID:
123641117
NCBI-ProteinID:
XP_045411584
LinkDB
All DBs
Position
7:31532900..>31534180
Genome browser
AA seq
427 aa
AA seq
DB search
MSLICSISNDVPEHQCVSSVSNHVYELRLIKKYIAENGTDPINNQPLSEEQLMDIKVAHP
IRPKPASATSIMTILKALQDEWNAVMLHSFTLRQQLQTTRQELSHALHQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPRAMPRSQPSVMGAGKPMDLGELVGMTPKIIQKLQDKA
TVLTMESNKRGKTVPEELVKPEELSKYWQVASHMDLHSASIPGILTLDLCPSNTNKILTG
GADKNVVVFDKSSQQILDTLKGHTKKVTSVVFHSSQDLVFSASPDATIRIWSVPNASCVQ
VVWAHKSAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGCALTKVIDETSGCSLTCAQFHP
DRLIFETVTMDSQIKILDLKERTNVANFPGHSGPITNITFSENGYYLATAADDSSVKLWD
LCKLKTK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgatctgctccatctccaatgatgtgccagagcaccagtgtgtgtcctctgtc
tctaatcatgtctacgagctgcggctcatcaagaagtacattgcagagaatggtacagac
cccatcaacaaccagcctctctctgaggagcagctcatggacatcaaagttgctcaccca
atccggcccaagcctgcctcagccactagtatcatgaccattctgaaagctttgcaagat
gaatggaatgcagtcatgctgcacagcttcactctgcgccagcagctgcagacaacccgc
caagagctgtctcatgccttgcaccagcatgatgctgcctgccgtgtcattgcccgtctc
accaaggaagtcactgctgccagagaagctctggctaccctgaaaccacaagctggtctc
attgtgcctcgggctatgccaaggtcccagccaagtgttatgggtgcaggcaagccaatg
gatttgggtgagctggtgggaatgacccccaagattatccagaagcttcaagacaaggcc
actgtgctaaccatggagagtaacaagagggggaagactgtgcctgaggagttggtgaag
ccagaagagctcagcaaatactggcaggtggcatcccacatggacttgcacagtgccagc
attcctgggatcctcaccctggacctctgtccctccaacaccaacaagatcctcactggt
ggggcagataaaaatgtcgttgtctttgacaagagttctcagcaaatcctggacaccctc
aaaggccataccaagaaggtcaccagtgtggtgtttcactcttcccaggacctggtgttt
tctgcctctccagatgccactatcaggatttggtcggtcccaaatgcctcttgtgtacag
gttgtttgggcacataagagtgcagtgactggcctcagcctccatgccactggtgactat
ctcctgagctcttctgatgaccagtactgggctttctctgacatccagacagggtgtgcg
ctcaccaaggtgatagatgagacctctggctgctctctcacttgtgcacagttccaccct
gacagactgatctttgaaacggtaaccatggactctcagatcaagatcttggacttgaag
gagcgcaccaatgtggccaacttccctggccactcaggccccatcactaacattaccttc
tctgagaatggctactacctggctacagcagctgacgactcctctgtcaagctctgggat
ctgtgcaagcttaagaccaaa
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