Lemur catta (Ring-tailed lemur): 123641139
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Entry
123641139 CDS
T08326
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcat04040
]
123641139 (SCN11A)
Ion channels [BR:
lcat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123641139 (SCN11A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
123641139
NCBI-ProteinID:
XP_045411602
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Position
1:143785302..143864472
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AA seq
1777 aa
AA seq
DB search
MDDRCYPVIFPDARNFRPFTSDSLAAIEKRIAIQKDKKKSEEQTGAEPQLRPQLDLKASR
KLPKLYGDIPCELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFILGPFNSIRS
LAIRISVHSLFSMFIICTVIINCVFMAARLGNYSNTDPPELVFTGIYIFEALVKILARGF
ILDEFSFLRDPWNWLDSIVIGTAIVSYLPQFSFRMSSLRTFRVFRALKAISVVSGLKVIV
GALLRSVQKLVNVMILTLFCLSIFALVGQQLFMGGLNQKCVRKDCENISDLEAHDYCFEK
KQNSTEFRMCGNWMVNNACSEQFQCKHTKINPDYSYTNFDNFGWSFLAMFRLMTQDSWEK
LYQQTLRTCGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKMFQE
AQQLLKEEKEALVAMGIDRSSLTSLEASSFSPKKRKLFGYKKRKSLFFRESRKDQAPGSD
SDEDSSKKPHLLQQTKRLSQNLSVDHFDEHGDPFQRQRALSAVSILTITMQEQEKAQEPC
LPCGKDLASKYLVWDCSPQWLCIKKALRTVMTDPFTELAITICIIINTIFLAMEHHDMNR
DFESMLNTGNLVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVAVLSFADVMNCLSGK
QKWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGHSIGALGNLTVVLAIVVFIFSVVGMQLF
GSKFKSIKSKKFCDTPVPCLRRWHMEDFYHSFLVVFRILCGEWIENMWECMQEAEIPLCV
IVFVLIMVIGKLVVLNLFIALLLNSFSNEERDGNLEGEARKTKVQLALLRFRQAFCFVIH
TLEHFCQKWCRRKNLPKQEVTGGPAADSKDIIPLVTEMKRGPETQEAFGILTSTPKTLGI
GYDRTWLAPLAEEEDDVESPDEEYAQPITQPEAERQAYELHQETKKPTSPGVQSVEIDVF
SVDDTCLAIQNPRKKSDATSMLSECSTIDLQGTFGRLPQMVPKKEPERCFPKGLGCCFPC
CSMDKRKTRCITWWKLRKTCYQIVNHSWFESFIIFVILLSSGALVFEDVNLNNQPKIREL
LDYTDNIFTYIFILEMGLKWVAFGFRKYFTSAWCWLDFIIVIVSVTSLIELNLKYFRTLR
ALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCING
TDTNSLIDYKIVADRAQCENGSFSWYNGEVNFDNVGNAYLALFQVATFKGWMDIMYAAVD
SRGKGQQPGFEQNSYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDIVIISLIILNMISMMAESD
NQPANTKLVLERLNLAFVVIFTIECLIKIFALRQYYFTNGWNLFDCVIVVLSIVSTMISA
LEHQEHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVM
FIYAIFGMNCFSEVKPGSGIDDIFNFQTFAGSMLCLFQITTSAGWDALLKPMLRSENSCN
SSPDNCRHLPVIATTYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFY
EVWEKFDPEATQFIRYSALSDFADSLPEPLRVAKPNKFQFLVMDLPMVSGDRLHCMDILF
AFTTRVLGDSSGLDSMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEERGAAIIQKAFRKY
RKMTKGDLENRPHSPLETLCNGDLSSSGVAKGKAHYD
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtgatcttcccggatgcccgaaatttccgccccttcact
tctgactctctggctgcaattgagaagcggatagccatccaaaaggacaaaaagaagtct
gaagagcagacaggggcagaaccccagcttcggcctcagcttgacctaaaggcctctagg
aagttgcccaagctctacggtgacattccctgtgagctgatagcaaagcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcattttggggcctttcaattcaatcagaagt
ttagccattagaatctcagtccattcattgttcagcatgttcatcatctgcacggttatc
attaactgcgtgttcatggccgcaaggcttggtaactacagtaacacggatcctcccgag
cttgtcttcactgggatttatatttttgaagctttggtaaaaatattggcaagaggtttt
attctggatgaattttctttccttcgagatccatggaactggctggactccattgtcatt
ggaacagcgattgtatcatatttgccacagttcagcttcaggatgtcatcactgcgtacc
ttccgagtgttcagagctttgaaagccatttcagtagtttcaggtctgaaggtcattgtg
ggggccttgctgcgctctgtgcagaaactcgtcaacgtgatgatcctgaccctcttctgc
ctcagcatcttcgccctggtaggtcagcagctcttcatgggaggtctgaatcagaaatgt
gtcaggaaggactgtgagaatatcagtgaccttgaagctcacgattattgttttgaaaag
aagcaaaattccactgaattcagaatgtgtggcaactggatggttaacaatgcctgttct
gaacaatttcaatgcaagcacaccaaaattaatcctgactatagttacacgaattttgac
aactttggctggtcttttcttgccatgttccggcttatgacccaagattcctgggagaag
ctttaccaacagaccctgcgcacctgtgggctctattcagtcttcttttttgtggtggtc
atcttcctgggctccttctacctgattaacttaaccctggccgttgtcaccatggcttat
gaggagcagaacagaaatgtagctgcagagacggaggccaaggaaaagatgtttcaggaa
gcccagcagctgctaaaggaggagaaggaggctctggttgccatgggaattgacagaagt
tcacttacttcccttgaagcatcatccttttctcccaaaaagagaaagctctttggttat
aagaaaaggaagtccctctttttcagagagtctaggaaagatcaggctccaggatcagat
tctgatgaagattcctccaaaaagccacacctcctacagcaaaccaaacgactgtcccag
aatctgtcagtggaccactttgatgagcatggagaccccttccaaaggcagagagcactg
agtgctgtcagcatcctcaccatcaccatgcaggaacaagaaaaagcacaggaaccttgt
ctcccatgtgggaaagacctggcatccaaataccttgtgtgggactgtagcccccagtgg
ctatgcattaagaaggccctgagaactgtgatgactgacccctttactgagctggccatc
accatctgcatcataatcaacactatctttttggccatggagcatcatgatatgaaccgc
gattttgagtctatgttgaacacagggaatttggttttcactggcattttcatagcagaa
atgtgcctaaaaatcattgcactcgacccctaccactactttcgccgaggctggaacatt
tttgacagcattgttgctgttctgagttttgcagatgtgatgaactgtctctctggaaaa
caaaaatggccattcttgcgctccttcagagtgctgagggtcttcaagttagccaaatcc
tggccaactttaaacacactaataaagataatcggccactccattggagcccttggaaac
ctgactgtggtcctagccattgtggtctttattttctcagtagttggcatgcagcttttt
ggctctaaattcaagtccataaagagtaaaaaattctgtgacactcctgtcccctgttta
cggcgctggcacatggaggatttttaccactccttcctggtggtattccgcatcctttgt
ggggaatggattgaaaacatgtgggaatgtatgcaggaagctgaaataccattgtgtgtt
attgtctttgtgttgatcatggtgataggaaaacttgtggtgctcaacctcttcattgcc
ttactgctcaattcctttagcaatgaggagagagatggaaacttagaaggagaagccagg
aaaactaaagtccagttggccctgcttcggttccgccaggctttttgttttgtaatacac
actcttgagcatttctgtcaaaagtggtgcaggaggaaaaacttaccaaagcaagaagtg
acaggaggtcctgctgcagacagcaaagacatcattcccctggtcacagagatgaaaagg
ggaccagaaacccaggaggcatttggcatactaacctctacaccaaagaccttgggcatt
gggtatgatcggacttggctggccccacttgcagaggaagaagatgatgttgagtctcct
gatgaagaatatgcacagcccatcacacaacctgaggctgaaagacaggcctatgaactc
catcaggagaccaagaagcccaccagcccaggagttcaaagtgtggaaattgacgtgttc
tctgtagacgatacttgtctggctatacagaatccccgaaagaagtctgatgctaccagt
atgctatcagaatgcagcaccattgatctgcagggtacatttggacggttacctcaaatg
gttcccaaaaaggaaccagagagatgtttccccaaaggcctgggttgctgctttccatgt
tgtagcatggacaagagaaagacccgctgcatcacttggtggaaactgcggaaaacctgc
taccaaattgtgaatcacagttggtttgagagctttattatctttgtgattctgctgagc
agtggggcactggtatttgaagatgttaaccttaataatcaacccaaaatccgagaacta
ctagattatactgacaatattttcacatatatttttatcctggagatgggtctgaaatgg
gtggcctttggatttagaaagtatttcaccagtgcctggtgctggctcgacttcatcatt
gtgatcgtctctgtgaccagtctcattgagttaaacttgaagtacttccggactctacga
gcgctaaggcctcttcgagcactgtcccagtttgaaggaatgaaggtggtggtcaatgct
cttataggcgccatacctgccattctgaatgttttacttgtctgcctcattttctggctc
atattttgtatcctgggagtaaacttcttttctggaaaatttggaagatgcattaacgga
acagatacaaactcacttattgattataagatcgttgccgaccgagctcaatgtgagaat
ggcagtttctcctggtacaacggggaagtcaactttgacaatgtggggaacgcttacctg
gcgctgtttcaggtggcaacatttaaaggctggatggatattatgtatgcagctgttgat
tccagagggaaaggacaacagccagggtttgagcagaattcatacatgtacctttacttc
gtggtttttatcatctttggctcgttcttcactctgaatctctttattggtgttattatt
gacaacttcaaccaacagcagaaaaagataagtggccaagacatttttatgacagaagaa
cagaagaaatactataatgcaatgaaaaaattgggatccaaaaaacctcagaaacccatt
ccaaggcctctgaacaaatgtcaaggtctcgtgtttgacctagtaacaagccaggtcttt
gacatcgtcatcataagtctcattatcctaaacatgattagcatgatggctgaatcagat
aaccaacctgcaaacacaaaactcgtccttgagcgtctcaacctggcctttgtggtcatc
tttacaatagagtgtctcatcaaaatctttgctttgaggcaatactacttcaccaatggc
tggaatttatttgattgtgtgatcgtggttctttctatcgttagtacaatgatttctgcc
ttggaacaccaggagcacattcctttccctccgacgctcttcagagttgtccgcttggct
cggattggccgaatcctgaggcttgtgcgtgcagcccgaggaattaggactctccttttt
gctctgatgatgtctctcccctctctattcaacattggtcttctactctttctggtgatg
tttatttacgccatttttggtatgaactgtttttccgaagtgaagccagggtctggaatt
gatgacatattcaacttccaaacattcgccggcagcatgctctgtctcttccagataacc
acgtcagcaggttgggatgccctcctcaagcccatgctgcgttcagaaaactcctgtaat
tcctccccagacaactgtcgccacctccctgtcatagccacaacctactttgtcagttac
atcattatctcctttctcattgttgtcaacatgtatattgctgtgattttagagaacttc
aatacagccactgaagaaagtgaggaccctctgggtgaagatgactttgaaatattctac
gaagtctgggaaaagtttgacccagaagcaacacagtttatcagatattctgccctttct
gacttcgccgattccctacctgagcctttgcgtgtggcaaagccaaataaatttcaattc
ctagtaatggacttgcccatggtgagtggggatcgcctccactgcatggatattcttttc
gccttcaccactagggtgcttggtgactccagtggtctggatagcatgaaagcaatgatg
gaggagaagttcatggaagccaatcctttcaagaagttatatgaacccatagtcaccacc
accaagagaaaggaagaggagagaggtgctgctattattcaaaaggcctttcgaaagtat
aggaaaatgaccaagggtgacttggaaaacaggcctcattcaccactcgagactctttgc
aatggagatttgtccagctctggggtggccaagggcaaggcccactatgactga
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integrated database retrieval system
