Lemur catta (Ring-tailed lemur): 123641147
Help
Entry
123641147 CDS
T08326
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcat04040
]
123641147 (SCN10A)
Ion channels [BR:
lcat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123641147 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
CcmD_alt
GPHH
Motif
Other DBs
NCBI-GeneID:
123641147
NCBI-ProteinID:
XP_045411615
LinkDB
All DBs
Position
1:143924655..144007559
Genome browser
AA seq
1958 aa
AA seq
DB search
MEFPSGILQTTNFRRFTPESLVEIEKQIAAHEAAKKAKGKHREQKDQKEKPRPQLDLKAC
NQLPKFYGDLPEELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKMSVHSYPLWFSLFITVTILVNCVCMTQNDLPDGVEYVFTVIYTFEALLKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGAATDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVRNHTALNEVVNYSTHRENFY
INKPGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDSW
ERLYQQTLRASGKIYMVFFVIVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKKF
QEALEMLRKEQEVLAALGVDTASLRSHNGSPLTSKNTNERKNRMKPRVSECSTDDNKSPQ
PDPYNQRRMSFLGLTSGRRRASHGSVFHFRAPGQDISLPDGVTDDGVFPGDHESHRGSLL
LGGGAGQQGPRPRSPLPQPPNSGSRHGVDGHPTLPTSELVPGATEVSAFNAGQKKTFLSA
EYLNEPFRAQRAMSVVSIITSVLEELEESEQRCPPCLTSLAQKYLIWECCPTWVKLKTIL
FGLVTDPFTELTITLCIVVNTVFMAMEHHGMSPAFEAMLQTGNIVFTIFFTAEMVFKIIA
FDPYYYFQKKWNIFDCIIVTVSLLELSVVKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIK
IIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRINRGKISAPDEDWPRWHMYDFFHS
FLIVFRILCGEWIENMWACMEVGDKSICLVLFLTVMVLGNLVVLNLFIALLLNSFSADNL
AAPEDDGEVNNLQVALTRIRVFGLRTRQALCGFFSRPCLLPRPKVEPELVVKLPLSITKA
ENHVAANAVLGSLGGLPAPRGPRDEYSDFITNPNVPVSVPIAEGESDLDDLEDDGEEDAW
SSQQDVIPKGQQEQLQQVERCEHHLPPRSPGSGMSSEDLNPYLGEKWKEEDVPQAPAEGV
DDTSSSEGSTVDCPDPEEILRKIPELADELEEPEDCFTEGCIRRCPCCKVDTTKLPWATG
WQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDEKPRVKALLEYTDRVFTFIFV
FEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLTAKILDYSEIAPIKALRTLRALRPL
RALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINTTKEDF
SLVPLSIVNNKSDCVIQNYTSNFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVD
SREVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIVIMVLICLNMITMMVETD
EQSEEKTKVLGKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFIVVVLSIASLVFSA
ILKSLESYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYSIFGMSSFPNVRQEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYC
DPNLLNSNGSRGNCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLNE
DDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLQIPKPNRNILMQMDLPLVPGDKI
HCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKSSYEPIATTLRWKQEDISATVI
QKAYRSYVRHRSLTLSNPPRVPRAEEEAASLPDEGFVAFMANENCVLPDKSATASATSFP
PSYDSVTRGLSDRVNMSTSSSMQNEDEATSKEVTAPGP
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccttctgggatcctgcaaactaccaacttccgtcggttcactccagagtca
ctggttgagattgagaagcaaattgctgcccatgaggcagcaaagaaagccaaaggaaag
catagggagcagaaagaccaaaaagagaagcctcggcctcagctggacttgaaagcctgc
aaccagctgcccaagttctatggcgacctcccagaagaactgatcggggagcccctggag
gatctagaccccttctacagcacacatcggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggctattcagtcctttcaacctgatcaga
agaacggccatcaaaatgtctgtccactcatatcctttgtggttcagtttatttattaca
gtcactattttggtcaattgtgtgtgcatgacccaaaatgatcttccagatggagttgag
tatgtcttcactgtcatttacacctttgaagccttgttaaagatcctggcgagaggattt
tgtttaaatgagttcacttacctgcgagatccttggaactggctggattttagcgtcatt
accttggcatacgttggtgcagcgacagatctccgaggaatctcaggcctgcggacgttt
agagttcttagagctttaaaaacagtttctgtgatcccagggctgaaggtcattgtgggg
gccctcatccactcggtgagaaagctggctgatgtgaccatcctcaccatcttctgccta
agtgtctttgccctggtgggcctgcaactcttcaagggcaacctcaagaacaaatgcgtc
aggaatcacacagctctcaacgaggtggtcaactactcaactcacagagaaaatttctac
attaataagccaggcacttctgatcccttactgtgcggcaatggatctgattcaggccac
tgccctgatggttatatctgccttaaaacttctgacaacccagattttaactacacgagc
tttgattcctttgcttgggctttcctctcactgttccgcctcatgacacaggattcctgg
gaacgcctctaccagcagaccctgagggcttctgggaaaatctatatggtctttttcgtg
attgtcattttcctgggatctttctacctggtcaacttgatcttggctgtggtcaccatg
gcatatgaggagcagaaccaggccacaattgatgaaattgaagcaaaggagaagaagttc
caggaggcccttgagatgctccgtaaggagcaggaggtgctggcagcactgggggttgac
acagcctctctccgttcccacaatggatcacctttaacctccaaaaataccaatgagaga
aagaacagaatgaagccaagagtctcagagtgctccacagatgacaacaaatcaccccaa
cctgacccttacaaccagcgcaggatgtctttcctaggcctcacctctggaagacgccgg
gctagccatggcagtgtgttccatttccgggcccctggccaagatatctcactccctgat
ggagtcacagatgatggagtctttcctggagaccacgaaagccatcgaggctccctgctg
ctgggtgggggtgctggccagcaaggccctcgccctaggagcccactgcctcaacccccc
aactctggctccaggcatggagtagatggacaccccacattgcccactagtgagcttgtc
cctggagccactgaagtctcggcattcaatgcgggacagaagaagactttcttgtcagca
gaatacttgaatgaacctttccgagcccaaagggcaatgagtgttgtcagtatcataacc
tccgtccttgaggaactcgaggagtctgaacagaggtgcccaccctgcttgaccagcttg
gctcagaagtatctgatctgggagtgctgccccacatgggtgaagctcaagacaattctc
tttgggcttgtgacggacccctttacggagctcaccatcaccctgtgcatcgtggtgaac
acagtcttcatggccatggaacaccacggcatgagccccgcctttgaagccatgctccag
acgggcaacattgtctttaccatatttttcactgctgaaatggtcttcaaaatcattgcc
tttgatccctactattacttccagaagaagtggaatatctttgactgcatcatcgtcacc
gtgagcctgttggagctgagtgtggtcaagaaggggagcctgtctgtgctgcggaccttc
cgcttgctgcgagtcttcaagctggccaagtcctggccaaccttaaacacactcatcaag
atcatcggaaactcggtgggggctctggggaacctcaccatcatcctggccatcattgtc
tttgtcttcgctctggttggcaagcagctcctaggggaaaactaccgcatcaatcggggg
aaaatctccgcgcccgatgaagattggccccgctggcacatgtacgatttcttccactcc
ttcctgatcgtcttccggatcctctgtggagagtggattgagaacatgtgggcctgcatg
gaagtcggcgacaaatccatctgtcttgtgcttttcttgacagtgatggtgctgggaaac
ctggtggtgcttaacctgttcatcgccctgctgttgaactctttcagtgccgacaacctc
gcagccccagaggacgatggggaggtgaacaacctgcaggtggccctgacacggatccgg
gtatttggccttcgcaccaggcaggccctttgcggcttcttcagtaggccctgcctgctc
ccccggcccaaggtagagcccgagctggtggtgaagcttcccctctccatcaccaaagcc
gagaaccacgttgctgccaatgccgtcctggggagcctgggagggctcccggcacccaga
ggccccagggatgagtacagtgacttcatcaccaaccccaatgtgccggtctctgtgccc
attgctgagggtgaatctgatctcgatgacttggaggatgatggtgaggaggatgcttgg
agctcccagcaggatgtgatccccaaagggcagcaggagcagctgcagcaagtcgagagg
tgtgagcaccacctgccacccaggagcccaggctctggaatgtcatccgaggacctgaat
ccatacctgggtgagaagtggaaagaggaggatgttccccaggcccctgcagagggagtg
gacgacacaagttcctcggagggcagcacggtggactgcccggaccctgaggagatcctg
aggaagatccctgagctggcagatgaacttgaagaaccagaggactgcttcacagaagga
tgcattcgccgctgtccctgctgtaaagtggacaccaccaagcttccgtgggccacgggc
tggcaggtgcgcaagacctgctaccgcatcgtggagcacagctggttcgagagcttcatc
atcttcatgatcctgctcagcagtggctctctggcctttgaagactattacctggacgag
aagcccagagtgaaagcattgctggagtacaccgacagggtgttcacctttatctttgtg
tttgagatgctgctcaagtgggtggcctatggcttcaaaaaatacttcaccaatgcctgg
tgctggctggacttcctcattgtgaacatctcactgacaagcctcacagcgaagatcctg
gactattctgagatagctcccatcaaagcccttcggactctccgtgccctgaggccgctg
cgggctctgtctcgatttgaaggcatgagggtggtggtggatgcgctggtgggtgccatc
ccgtccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatcatg
ggcgtgaacctcttcgcagggaagtttgggaggtgcatcaacaccaccaaggaagatttt
tctcttgtgcctttgtcaattgtgaataacaagtctgattgtgtgattcaaaactacacc
agcaacttcttctgggtcaatgtgaaagtcaactttgataatgttgcaatgggttacctt
gcacttcttcaggtggcgacctttaaaggctggatggacatcatgtacgcagctgtcgat
tcccgagaggtcaacatgcagcccaagtgggaggacaatgtgtacatgtacttgtacttt
gtcatcttcatcatttttggcggcttcttcacactgaatctctttgttggggtcataatt
gacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatgacagaggaa
cagaaaaagtactacaacgccatgaagaaactgggctccaagaagccccagaagcccatc
ccacgtcctctgaacaagtaccagggcttcgtctttgacattgtgaccagacaagctttt
gacatcgtcatcatggttctcatctgcctcaacatgatcaccatgatggtggagactgac
gagcagagtgaagaaaagacaaaagtccttggcaaaatcaaccagttctttgtggctgtc
ttcacgggcgagtgtgtcatgaagatgtttgccttgaggcattactacttcaccaatggc
tggaatgtgtttgacttcatcgtggtggttctctccattgcgagcctggtgttttctgca
attctcaagtcacttgaaagttacttctccccgacactcttccgggtcatccgcctggcc
cgaatcggccgcatcctcagactgatccgggcagccaaggggatccgcacgctgctcttt
gccctcatgatgtccctgcctgccctcttcaacatcgggctactgctcttcctcgtcatg
ttcatctactccatctttggcatgtccagctttcccaatgtgaggcaggaggctggcatt
gatgacatgttcaacttccagacctttgccaacagcatgctgtgcctcttccagatcacc
acgtcagctggctgggatggcctcctcagccccatcctcaacacggggcccccctactgt
gaccccaatctgctcaacagcaatggctcccgagggaactgcgggagcccagctgtgggc
atcatcttcttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtacatt
gcagtgattctggagaacttcaatgtggccacagaggagagcaccgagcccctgaacgag
gacgactttgacatgttctatgagacctgggagaagttcgatcccgaggccacccagttt
attaccttctctgccctctccgactttgcagacactctctctggtcccctgcaaatccca
aagcccaatcggaatatattaatgcagatggacctgcccttggtccctggagataagatc
cactgtttggacatcctttttgctttcaccaagaacgtgctaggcgaatccggggagttg
gattctctgaaagcaaacatggaagagaagtttatggcaactaatctttcaaaatcatcc
tatgaaccaatagcaaccaccctccggtggaagcaagaagacatttcagccactgtcatt
caaaaagcctatcggagctatgtgcggcaccgctccttgacactctccaaccctccacgt
gtgcccagggctgaggaggaggctgcctcactcccagatgagggctttgttgcattcatg
gcaaatgaaaattgtgtactcccagacaaatctgcaactgcatctgccacatctttcccg
ccatcctatgacagtgtcactagaggccttagtgatagagtcaatatgagcacatctagc
tcaatgcaaaatgaagatgaagccaccagtaaggaggtgactgcccctgggccctag
DBGET
integrated database retrieval system
