KEGG   Lemur catta (Ring-tailed lemur): 123641249
Entry
123641249         CDS       T08326                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat03420  Nucleotide excision repair
lcat04120  Ubiquitin mediated proteolysis
lcat05161  Hepatitis B
lcat05170  Human immunodeficiency virus 1 infection
lcat05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123641249 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123641249 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    123641249 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    123641249 (DDB1)
   05161 Hepatitis B
    123641249 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcat04121]
    123641249 (DDB1)
   03400 DNA repair and recombination proteins [BR:lcat03400]
    123641249 (DDB1)
Ubiquitin system [BR:lcat04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     123641249 (DDB1)
DNA repair and recombination proteins [BR:lcat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123641249 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123641249 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 123641249
NCBI-ProteinID: XP_045411756
LinkDB
Position
7:complement(98826299..98855051)
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccaccgctgtgaacggctgcgtgacc
ggacattttacttcggctgaagatttgaacctgttgattgccaaaaacacgagattagag
atctatgtggtcaccgctgaggggcttcggccggtcaaagaggtgggcatgtatgggaag
attgccgtcatggagcttttcaggcccaagggggagagcaaggacctgctgtttatcctg
acagctaagtacaatgcctgcatcctggagtataagcagagtggcgagagcattgatatc
attacgagagcccatggcaatgtccaggaccgtattggccgcccctcagagactggcatt
attggcatcattgaccctgagtgccggatgattggcctgcgactgtacgatggccttttc
aaggttattccactagatcgggacaataaagagctcaaggcatttaatatccgcctggag
gagttgcacgtcatcgacgtcaaattcctatatggttgccaagcacctaccatttgcttt
gtctaccaggaccctcaggggcggcacgtaaaaacctatgaggtgtctctccgagagaag
gagttcaataaaggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatt
gcagtcccagagccctttgggggggccatcatcattggacaggaatcaatcacctatcac
aatggcgacaaatacctggcgattgcccctcctatcatcaagcaaagcacgattgtgtgc
cacaatcgagtggaccctaatggttcaaggtacctgctgggagacatggaaggacggctt
ttcatgctgcttctggagaaggaggaacagatggatggcactgtcaccctcaaggatctc
cgagtggaactccttggggagacctctattgctgagtgcttgacatacctggataatggt
gttgtgtttgttgggtctcgcctgggcgactcccagcttgtgaagctcaacgttgacagt
aatgaacaaggttcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gacatgtgcgtggtggacctggagaggcaggggcaggggcagctggttacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaattggaatccatgagcatgcc
agcattgacttacccggcatcaaaggcttatggccactgcggtctgaacctaaccgtgag
actgatgacactttggtgctctcttttgtgggccagacgagagttctcatgttaaatgga
gaggaagtggaagaaactgaactgatgggttttgtggacgaccagcagactttcttctgt
ggcaacgtggctcaccaacagcttatccagatcacatcagcatcggtgaggttggtctct
caagaacccaaagctctggtcagtgaatggaaggagcctcagggcaagaacattagtgtg
gcctcctgcaacagcagccaggtagtggtagctgtgggcagggccctctactacctgcag
atccatcctcaggagctccgacagatcagccacacagagatggaacatgaagtggcatgc
ttggacatcacaccattaggggacagcaatgggatgtctcctctttgtgccattggcctc
tggacagacatctcagctcgtatcttgaaactgccctcttttgaactattgcataaggag
atgctgggtggagagatcattcctcgctccattctgatgaccacctttgagagcagccac
tacctcctttgtgccttgggagatggggcacttttctactttgggctcaacattgagaca
ggcttgttgagcgaccgtaagaaggtgactttgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtgaactacatgtgt
cccctcaactcagatggctatcctgacagcctggcactggccaacaacagcaccctcacc
attggcaccatcgacgagatccagaagctgcacattcgcacagttcccctctacgagtct
cccaggaagatatgctatcaggaagtgtcccagtgtttcggggtcctctccagccgcatt
gaggtccaagacacaagtgggggcacaactgctctaaggcccagtgccagcacccaggcc
ctgtccagcagtgtcagctccagcaagctgttctccagcagcacagctccgcacgagacc
tcctttggagaagaggtggaggtgcacaacctcctcatcatcgaccagcacacctttgaa
gtgcttcatgcccaccagtttctgcagaacgagtatgccctcagcctggtctcttgcaag
ctgggcaaagaccctaacacctacttcatcgtgggcacagccatggtatatcctgaagag
gcggagcccaagcagggtcgcattgttgtctttcagtattcagatggaaaactgcagact
gtggctgaaaaggaagtgaaaggggctgtgtactccatggtggaatttaatgggaagctg
ctagccagcatcaatagcacggtgcggctttatgagtggacgacagaaaaggagctgcgc
accgagtgcaatcactacaacaacatcatggccctctacctgaagaccaagggagacttc
atcctggtgggcgacctcatgcgctcagtgctgctgctggcctacaagcccatggaaggg
aacttcgaagagattgctcgagactttaatcccaactggatgagtgctgtggaaatcttg
gatgatgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agcgctgccaccactgatgaggagcggcaacaccttcaggaggttggtctcttccacctg
ggcgagtttgtcaatgtgttttgccatggctctctggtcatgcagaatctgggcgagacg
tccacccccacacaaggctcagtgctgttcggcacagtcaacggcatgatcggcctggtg
acttcgctgtcagagagctggtataacctcctgttggacatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagattgaacactccttctggagatcctttcacactgagcgc
aagacagaaccggccaccggcttcatcgatggcgacttgattgagagtttcctggatatc
agccgccccaagatgcaggaggttgtggcaaacctacagtatgacgatggcagcggtatg
aagcgagaggccaccgcagatgacctgatcaaagttgtggaggagctgactcggatccat
tag

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