Lemur catta (Ring-tailed lemur): 123641494
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Entry
123641494 CDS
T08326
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04140
Autophagy - animal
lcat04148
Efferocytosis
lcat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123641494 (VPS11)
04148 Efferocytosis
123641494 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123641494 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123641494 (VPS11)
Membrane trafficking [BR:
lcat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123641494 (VPS11)
Hops complex
123641494 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
DUF1993
zf-RING_11
zf-HC5HC2H
zf-ANAPC11
zf-C3HC4_3
TSGP1
zf-RING-like
zf_RING_Vps8_fungal
DLP_helical
DUF5847
Motif
Other DBs
NCBI-GeneID:
123641494
NCBI-ProteinID:
XP_045412273
LinkDB
All DBs
Position
7:complement(21316293..21325694)
Genome browser
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGSDGAAPGAAPASGSAVSKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLHCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQSSDKQILNIYDLCNKFIAYSAVFEDIVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALQYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGQGDRETPGCRASSEEFIPIFANN
PRELKAFLEHMSEVQTDSPQGIYDTLLELRLQNWAHEKDPKVKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQDPSLW
EQALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLTPSLEAGLQRDLLIHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgcttcgttttcttcgacaaggagttggtgaaggaa
ccgctgggcagtgatggggccgctcccggggccgcacctgcctctggatccgctgtttcc
aagttcctttgcctgcctcctggcatcactgtttgcgactcgggccgagggagcctggtc
tttggagatatggaaggccagatctggttcttgccacgctccctacagcttacaggcttc
caggcctacaaactacgggtgacacacctgtaccagctgaagcaacacaatattctggca
tctgttggggaagatgaagagggcatcaaccccctggtaaagatctggaacctggagaag
agagatggtggcaatccactctgcactcgaattttccctgccatcccagggacagagcca
actgttgtgtcttgtttgactgtacacgaaaatctcaactttatggccatcggtttcaca
gatggcagtgttacattaaacaaaggagacatcacccgggaccggcatagcaagacccag
attttgcacaagggcaactatcctgttactggactggcctttcgccaagcaggaaagacc
actcacttgtttgttgtgacaacagagaatgtccagtcctatatagtttctggaaaggac
taccctcgtgtggagttggacacccatggttgtggcctgcactgctcagccctaagtgac
ccttctcaggacctgcagttcattgtggccggggatgagtgtgtctacttgtaccagcct
gatgaacgtgggccctgcttcgcctttgagggccataagcttattgcccactggtttaga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc
agggactcacagagctctgacaagcagattctcaacatctacgacctgtgcaacaagttc
atagcctatagtgccgtctttgaggatatagtggatgtgcttgctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctgtttaagaagaacctatttgagatggcaattaacttggccaagagtcaa
catttggacagtgatggtctggcccaaatcttcatgcagtacggagaccatctctatagc
aagggcaaccatgatggggctgtccagcagtacattcgaaccattggaaagttggagcca
tcctatgtgatccgcaagtttctggatgcccagcgcatccacaacctgactgcctacctg
cagaccctgcaccggcagtccctggccaatgctgaccataccaccctgctgctcaactgc
tacaccaagctcaaggacagctccaagctggaggagttcatcaagacaaagagcgagagt
gaagtccactttgatgtggagacagccatcaaggtcctccggcaggctggctactattcc
catgccctctatctggctgagaaccatgcgcatcacgagtggtacttgaagatccaacta
gaggacattaagaattatcaggaagcccttcagtatatcggcaagttgcctttcgagcaa
gcagagagcaacatgaagcgctatggcaagatcctcatgcaccacataccggagcagaca
acccagttgctgaagggactttgtactgactataggcccagccttgaaggccaaggcgat
agggagactccaggctgcagggccagctctgaggagttcatccccatctttgccaacaac
ccccgagagctgaaagccttcctagagcacatgagtgaagtgcagacagactcaccccag
ggcatctatgacactctgcttgaactgcgattgcagaattgggcccatgagaaggatcca
aaggtcaaggagaagcttcatgcagaggccatctccctgctgaagagtggccgcttctgt
gacgtctttgacaaggctctggtcctgtgccagatgcacgacttccaggatggggtcctt
tacctttatgagcaggggaaactgttccagcagatcatgcactaccacatgcagcacgag
cagtaccggcaggtgatcgctgtgtgcgagcgtcacggggagcaggacccatccctgtgg
gaacaagccctcagctactttgcccgcaaggaggaggactgtaaggagtacgtggcagct
gtgctcaagcatatcgagaacaaaaacctcatgccaccgcttctagtggtgcagaccctg
gcccacaactccacagccaccctgtccgtcatcagggactacctggtccaaaaactgcag
aaacagagccagcagattgcacaggatgagctgcgggtgcggcggtaccgagaggagacc
acccgcatccgccaggagatccaagagctcaaggcgagtccaaagattttccagaagacc
aagtgcagcatctgtaacagtgccttggagttgccctcagtccatttcctatgtggccac
tccttccaccaacactgctttgagagttactcagagagtgatgctgactgccctacctgc
ctccctgaaaaccggaaggtcatggatatgatccgggcccaggaacagaaacgagatctc
catgatcagttccagcaccagctaaagtgctctaacgacagcttctctgtgattgctgac
tactttggccgaggtgttttcaacaaattgactctgctgaccgaccctcccacagccagg
ctgacccctagcctggaggctgggctgcagcgagacctgctcatacactccaggaggggc
acttaa
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