Lemur catta (Ring-tailed lemur): 123642473
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Entry
123642473 CDS
T08326
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123642473 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcat04147
]
123642473 (COPB1)
Membrane trafficking [BR:
lcat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
123642473 (COPB1)
Exosome [BR:
lcat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123642473 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
123642473
NCBI-ProteinID:
XP_045413539
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All DBs
Position
7:complement(69302031..69342262)
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AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYIALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgccgagaacgtgtgctatacgttaattaacgtgccaatggattcagaacca
ccgtctgaaattagcctaaaaaatgatctagaaaaaggagatgtgaagtcaaagactgaa
gctttgaagaaagtaatcattatgattctgaatggtgaaaagcttcctggacttctgatg
accatcattcgttttgtgctacctcttcaggatcataccatcaaaaaattactactggta
ttttgggaaattgtccctaaaacaactccagatgggagacttttacatgaaatgattctt
gtatgtgatgcatacagaaaggatcttcaacatcctaatgaattcattcgaggatctact
cttcgttttctttgcaaattaaaagaagcagaattgctcgaacctttaatgccagccatc
cgtgcttgtttggagcatcgacacagctatgttagaagaaatgctgttttggccatctat
actatctatagaaattttgaacatcttatacctgatgcccctgaactgatacatgatttt
ctggtgaatgagaaagatgccagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattacctaagtacttgcattgatcaagttcaaacatttgga
gacattctgcagttggttattgttgaactaatttataaggtctgtcatgctaatccatca
gaaagagctcgtttcattcgctgcatctataacttattacagtcatctagccctgctgta
aaatacgaagctgctgggacattagtgacactctcaagtgcaccaactgcaatcaaggct
gctgctcagtgttacattgatttaattattaaggagagtgacaataatgtaaagctcata
gttttggatcgcttgatagaattaaaagagcatcctgcccatgaacgagtactacaggat
ctggttatggacatcctaagagtattgagcacaccagacttagaagtacgcaagaaaact
ctgcagttagcactggatcttgtctcttctaggaatgttgaagagctggttattgtcctg
aagaaggaagtgataaaaacaaataatgtgtctgagcatgaagatactgacaaatacaga
caactccttgtgcgaacattgcattcctgttctgtccgatttccggatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacaataatgaagcagcagctgccgatgtc
ttggaatttgttcgtgaagccattcagcgctttgataacctgagaatgcttattgttgag
aagatgcttgaagtctttcatgccattaaatctgtcaaaatttaccgaggagcattatgg
atcctgggagaatactgtagtaccaaggaagacattcagagtgtgatgactgaagtccgc
aggtcccttggggagattccaattgtagagtcagaaataaagaaagaagctggtgaatta
aaacctgaagaagaaataactgtggggccagttcagaaattggttactgaaatgggtacc
tatgcaactcagagtgcccttagcagttctagacctaccaagaaagaggaagacagacct
cccctgagaggattccttctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgcattgcgctacatagctttggttcaggagaagaaaaagcaaaattcg
tttgttgctgaggctatgttgctcatggctactatccttcatttgggaaaatcctctctt
cctaagaagccaattactgatgatgatgtagatcgaatttccctgtgcctcaaggtctta
tctgaatgttcacctttaatgaatgatattttcaacaaggagtgcagacagtccctttct
cacatgttatctgctaaactcgaagaagagaaattatcccaaaagaaagaatctgaaaag
aggaatgtgacagtacagcctgatgaccccatttctttcatgcaactaactgctaagaat
gaaatgaactgcaaagaagatcagtttcagctgagtttgctggcagcaatgggtaacaca
cagaggaaagaggcagcagatcccctagcatctaaacttaacaaggtcacccagttgaca
ggtttctcagatcctgtatatgcagaagcttatgttcatgtcaaccagtatgatattgtc
ctggatgtacttgttgtgaaccaaaccagtgatactttgcagaactgcacattagagtta
gctactctaggggatctgaagcttgtggaaaagccatctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgtcaaagtagcatcaacagaaaatggaataattttt
ggtaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtggtcctcagt
gatatccacattgacatcatggactatatccagcctgcaacttgcactgatgctgaattc
cgtcagatgtgggctgaatttgaatgggaaaacaaagtaacagttaacaccaatatgatt
gatttaaatgactatttacagcacatattaaaatcaaccaacatgaaatgcctcactcca
gagaaggccctttctggttactgtggctttatggcagccaacctttatgctcgttccata
tttggagaagatgcacttgcaaatgtcagcattgagaagccaattcaccagggaccagat
gccgctgttactggccacataagaattcgtgcgaagagtcagggaatggccttaagtctt
ggagataaaataaacttgtcacagaagaaaactagtatataa
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