Lemur catta (Ring-tailed lemur): 123642479
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Entry
123642479 CDS
T08326
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123642479 (SOX6)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123642479 (SOX6)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
123642479
NCBI-ProteinID:
XP_045413549
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Position
7:complement(70587140..70971081)
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AA seq
870 aa
AA seq
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MPSSSEVLADVVRESRIEEWKSCHFIRMSSKQATSPFACAADGEEAMTQDLTSREKEEGS
DQHMASHLPLHPIMHNKPHSEELPTLVNTIQQDADWDSVLSSQQRMESENNKLCPLYSFR
NTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCM
EKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQK
KLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIF
PHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSH
PQISPRLKGLSDRFGRNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPP
NTAGTVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQSLFPASK
TSPVTLPNKSSIPSPIGGSLGRGSSLGKWKSQHQEDTYELDILSSLNSPALFGDQDTVMK
AIQEARKMREQIQREQQQQQPHGVDGKLSSMNNMGLNNCRNEKERTRFENLGSQLTGKSS
EDGKLGPGVIDLTRPEDAEGNKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSE
PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLS
KIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTG
TGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGE
DEMEMYDDYEDDPKSDYSSENEAPEAVSAN
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgagttctgaagttctggctgatgtggtaagagaaagccggattgaagagtgg
aagagctgccacttcataagaatgtcttccaagcaagccacctctccatttgcctgtgca
gcagatggagaggaagcgatgacccaggatttgacctcaagggaaaaggaagagggcagt
gatcagcatatggcctcccatctgcctctgcaccccataatgcacaacaaacctcactct
gaggagctaccaacacttgtcaataccattcaacaagatgctgactgggacagtgttctg
tcatctcagcaaagaatggaatcagagaataataagttatgccccctatattccttccga
aatacctctacctcaccacataagcctgacgaagggagtcgggaccgcgagataatgacc
agtgttacttttggaaccccagaacgccgcaaagggagccttgccgatgtggtggacaca
ctgaaacagaagaagcttgaggaaatgactcggactgaacaagaggattcctcctgcatg
gaaaaactactttcaaaagattggaaggaaaaaatggaaagactaaataccagtgaactt
cttggagaaattaaaggtacacctgagagcctggcagaaaaagaacggcagctctccacc
atgattacccagctgatcagtttacgggagcagcttctggcagcgcatgatgaacagaaa
aaactggcagcctcacaaattgagaaacaacggcagcaaatggaccttgctcgccaacag
caagaacagattgcaagacaacagcagcaacttctgcaacagcagcacaaaattaatctc
ctgcagcaacagatccagcaggttcagggtcacatgcctccgctcatgatcccaattttt
ccacatgaccagcggaccctggcagcagctgctgctgcccaacagggattcctcttcccc
cctggaataacatacaaaccaggtgataactaccccgtacagttcattccatcaacaatg
gcagctgctgctgcttctggactcagccctttacagctccagaagggtcatgtctcccac
ccacaaattagcccaaggctaaagggcctaagtgaccgttttggcaggaatttggacacc
tttgaacatggtggtggccactcttacaaccacaaacagattgagcagctctacgccgca
cagctggccagcatgcaggtgtcacctggagcaaagatgccatcaactccacagccacca
aacacagcagggacagtctcacctactgggataaaaaatgaaaagagagggaccagccct
gtaactcaagttaaggatgaagcagcagcacagcctctgaatctctcatcccgacccaag
acagcagagcctgtaaagtccccaacatctcctacccagagtctcttcccagccagcaaa
accagccctgtcactctgccaaacaaaagcagcatccctagccccattggaggaagcctg
ggaagaggatcctctttaggtaaatggaaaagtcaacaccaggaagacacttatgaatta
gatatcctgtccagtctcaactcccctgccctgtttggggatcaggatacagtgatgaaa
gccattcaggaggctcggaagatgcgagaacagatccaacgggagcaacagcagcaacag
ccacatggtgttgatgggaaactgtcctccatgaataatatggggctgaacaactgcagg
aatgaaaaggaaagaacgcgctttgagaatttggggtcccagttaacaggaaagtcaagt
gaagatggaaagctgggcccaggtgtcatcgatcttacgcggccagaagacgcagaggga
aataaagcaatgaatggctctgcagctaaactacagcagtattattgttggccaacagga
ggtgccactgtggctgaagcacgagtctacagggatgcccgcggccgtgccagcagcgag
ccacacatcaagcgaccaatgaacgcattcatggtttgggcgaaggatgagaggaggaaa
atccttcaggccttcccagacatgcataactccaacattagcaaaatcttaggatctcgc
tggaaatccatgtccaaccaggagaagcaaccttattatgaagagcaggcccggctaagc
aagatccacttagagaagtacccaaactataaatacaaaccccgaccgaaacgcacctgc
attgtcgatggcaaaaagctccggattggggagtataagcaactgatgaggtctcggaga
caggagatgaggcagttctttaccgtggggcaacagcctcagattccaatcaccacagga
acaggtgttgtgtatcctggtgctatcactatggcaactaccacaccatcgcctcagatg
acatctgactgctctagcacctcagccagcccagagcccagcctcccggtcatccagagc
acttatggtatgaagacagatggcggaagcctagctggaaatgaaatgattaatggagag
gatgaaatggaaatgtatgacgactatgaagatgaccccaaatcagactatagcagtgaa
aatgaggccccagaggctgtcagtgccaactga
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