Lemur catta (Ring-tailed lemur): 123643203
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Entry
123643203 CDS
T08326
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04622
RIG-I-like receptor signaling pathway
lcat05161
Hepatitis B
lcat05162
Measles
lcat05164
Influenza A
lcat05168
Herpes simplex virus 1 infection
lcat05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
123643203 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
123643203 (IFIH1)
05171 Coronavirus disease - COVID-19
123643203 (IFIH1)
05164 Influenza A
123643203 (IFIH1)
05162 Measles
123643203 (IFIH1)
05168 Herpes simplex virus 1 infection
123643203 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcat04054
]
123643203 (IFIH1)
Enzymes [BR:
lcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123643203 (IFIH1)
Pattern recognition receptors [BR:
lcat04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
123643203 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
SNF2-rel_dom
Cas3-like_C_2
DUF3638
Motif
Other DBs
NCBI-GeneID:
123643203
NCBI-ProteinID:
XP_045414566
LinkDB
All DBs
Position
8:62108269..62157660
Genome browser
AA seq
1025 aa
AA seq
DB search
MSNDYSTDGSFRYLISCFRARVKMYIQVEPVLDYLTFLPADVKEQIQRTVANSGNMHAAE
LLLSTLEKGAWPLGWAQEFVEALRRAGSPLAARYMNPQLTDLPSPSCENAHDECLQLLNL
LQPTLVDKLLVRDVLDKCIEEKLLTIEDRNRIDAAENNGNESGVRELLRRIVQKENWFST
FLNVLRQTGNHKLVQELTGTDCSESNAEIENLSQEGGPEVEEPLLLATDQPSPEKADWGM
ENNSSESSFADSSVISESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENVAARA
SPEPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVI
VLVNKVPLVEQLFRKEFKPFLKKWYRITGLSGDTQLKISFPEVVQSYDVIISTAQILENS
LLNWESGEDAGVPLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNRLKKENKPVVP
LPQILGLTASPGVGGATKQAKAEEHILKICANLDASTIKTVKENLDQLKDHIKEPCKKFA
IADDTREDPFKEKLLEIMTSIQTYCQMNPMSDFGTQSYEQWVIQMEKKAAREGNRKDRVC
AEHLRKYNEALQINDTIRMIDAYNHLETFYNDVKEKKLAVQEDESDESSDDDVCDGVEDG
NDLKKPLKLDETDRFLMALFFENKRMLKKLAKNPEHENEKLTKLRNTIMEQYTRTEGSAR
GIIFTKTRQSAFALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRT
GKINLLIATTVAEEGLDIKECNVVIRYGLVTNEIAMVQARGRARADESTYVVLAHSGSGV
IERETVNHFREKMMYKAIDRVQNMKPEEYAHKICELQMQSIMEQKMKTKRSIAKHYQENP
SLITFLCKNCSVPACSGEDIHIIEKMHHVNMTPEFKELYVMRENKALKKKFSDYQTNGEI
ICKCGQAWGTMMVHKGLDLPCLQIRHFVVVFKNDSTKKQYKKWVELPITFPALDYPECCL
FSDED
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgactattctacagacggtagcttccgctacctcatctcgtgtttcagggcc
agggtgaaaatgtatatccaggtggagcctgtgctggactacttgacctttctgcctgca
gacgtgaaggagcagattcagaggacagtcgccaactccgggaacatgcacgcagctgaa
ctgcttctgagcaccttggagaagggggcctggcccctgggctgggctcaggaatttgtg
gaagccctccggagagccggcagccccttagctgcccggtacatgaacccccagctcact
gacttgccgtctccatcgtgtgagaacgctcacgatgagtgtctccaactgctgaacctc
cttcagcctaccctggtggacaagcttctggttagagacgtcctggataaatgcatagag
gagaaactgctgacaattgaagacagaaatcggattgatgctgcagaaaacaatggaaat
gaatcaggtgtaagagagctacttagaaggatcgtacagaaagaaaactggttttctaca
tttctgaatgttcttcgtcaaacgggaaaccataaacttgtccaagaattgacaggcact
gattgctcagaaagcaatgcagagattgagaatttatcacaagaaggtggtcctgaagtt
gaagagccacttcttttagccacagatcagccaagtccagagaaagcagactggggcatg
gagaataattcatcagaatcatcttttgcagattcttctgtaatttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggcagtgattcaggcaccatgggaagtgattcagatgaagagaatgtggcagcaagagca
tcccctgagccagaactccagctcaggccttaccaaatggaagttgcccaaccagccttg
gaagggaagaatatcatcatatgccttcctacagggagtgggaaaaccagagtggccgtt
tacattgccaaggatcatttggacaagaagaaaaaagcgtctgagcctggaaaagttata
gttcttgtcaataaggtaccgttagttgaacagctgtttcgcaaagagttcaaaccattt
ttgaagaaatggtatcgtattactggactaagtggtgatactcaactgaaaatatcattt
ccagaagttgtccaatcctatgatgttattatcagtacagctcaaatccttgaaaactcc
cttttaaactgggaaagtggagaagatgctggtgtcccgttgtcagacttttccctcatt
atcattgacgaatgtcatcacaccaacaaagaagcagtctacaacaacattatgaggcgt
tacttgaaacagaagttgaaaaacaataggctcaagaaagaaaacaaaccagtggttccc
cttcctcagatactgggactaacagcttcacctggtgttggaggggccacaaagcaagcc
aaagccgaagaacacattctaaaaatttgtgccaatcttgatgcatctactattaaaacc
gtgaaagaaaatcttgatcaactcaaagaccatataaaggagccatgcaagaagtttgcg
atcgcagatgacaccagagaagatccatttaaagagaaacttctagaaatcatgacaagt
attcagacttattgccaaatgaatccaatgtcggattttggaactcaatcctacgaacaa
tgggtcatccagatggaaaaaaaagctgcaagagaaggaaaccgcaaagaccgtgtttgt
gcggaacatttgaggaagtacaatgaggccctacaaattaacgatacaatccgaatgatt
gatgcatacaatcaccttgaaactttctataatgatgtaaaagaaaagaagcttgcagtc
caagaagatgagagtgatgagagtagtgacgatgatgtttgtgatggtgttgaagatggg
aatgatttaaagaaacctttgaaacttgatgagacagatagatttctcatggctttattt
tttgaaaacaaaagaatgttgaaaaagctggctaaaaacccagaacatgaaaatgaaaag
ttgaccaaattaagaaacaccataatggaacaatatacgaggactgagggatcagcacga
ggaataatcttcaccaaaacacgacagagtgcatttgccctttcccagtggattactgaa
aatgaaaaatttgcagaagtgggagtcaaagcccaccatctaattggagcaggacacagc
agtgagttcaagcctatgacacagaatgaacaaaaagaagtcattagtaaatttcgcact
ggaaaaataaatctgcttatcgctaccacagtggcagaggaagggctggatatcaaagag
tgtaatgttgttatccgttatggtctcgtcacgaacgaaatagccatggtccaggcccgc
ggtcgagccagagctgatgagagcacctatgttgtgcttgctcacagtggttcaggagtt
attgaacgtgagacagttaatcatttccgagagaagatgatgtataaagctatagaccgt
gttcaaaatatgaaaccagaagagtatgctcataagatttgcgaattacagatgcaaagt
ataatggaacagaaaatgaaaaccaagagaagtatcgcgaagcattaccaggaaaaccca
tcgctaataactttcctttgcaaaaactgtagtgtgccagcctgttctggggaagatatc
cacataattgagaagatgcatcatgtcaatatgacaccagaattcaaggaactctacgtt
atgagagaaaacaaagcactgaaaaagaagttttccgactatcaaacaaatggtgagatt
atctgcaaatgtggccaagcttggggaacaatgatggtacacaaaggcttagatttgcct
tgtctccaaataagacattttgtagtggttttcaaaaatgattcaacaaagaagcaatac
aaaaagtgggttgaattgcctatcacgtttcctgctcttgattacccagaatgttgtttg
tttagtgatgaggattag
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