Lemur catta (Ring-tailed lemur): 123643507
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Entry
123643507 CDS
T08326
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123643507 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123643507 (BARD1)
04121 Ubiquitin system [BR:
lcat04121
]
123643507 (BARD1)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123643507 (BARD1)
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123643507 (BARD1)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123643507 (BARD1)
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123643507 (BARD1)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123643507 (BARD1)
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
123643507 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
Ank_KRIT1
zf-C3HC4
zf-C3HC4_2
DUF268
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
123643507
NCBI-ProteinID:
XP_045415026
LinkDB
All DBs
Position
8:20207683..20284036
Genome browser
AA seq
770 aa
AA seq
DB search
MPGNRQPRVRSGNEPRPAPAMEPAGRGAWAHSRAALGRLEKLLRCSRCANILRDPVCLGG
CEHIFCSDCVSDCIGTRCPVCHTPAWIQDVKINRQLDSMIQLCSKLRNLLHDRKHSDLKE
DTSRKSLFNDAENKKNSIKMWFSPRSKKVRYVVSKISVQTQPQVMKDVNAQQASMYEFVS
ATPPVAVSERAKKTSKRSEKERKKKTVAEINQKWNLEAIKEDGELDSKEEFKEKLVSCRP
PSVIASHHRVNGEIDLLASGSVTESQCLGNLTEVSLPLAEQIESPDTESRNEVGTPEEKV
CENYLTPKKSLPLGHNGKRGCRNRLSSPVSKRCRSHIPSTSRDFVKQTVLLEDKPSSKRK
VGDTLRRKNRTILDESITSLSPGTPPSTLNTSSYRRMMSSSSAMKLLPSNLMAAKRNHRG
ETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN
STGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDNENMKSLLLLPEK
NESSPTSPCLVKNTGQRRDRPLVLIGSGLSSEQQNMLSELAVILKAKKCAEFDSTVTHVI
VPGDEVQSTLKCMLGILSGCWIMKFEWVKVCLKRKVCAQEEKYEIPEGPQRSRLNREQLL
PRLFDGCYFYFGGTFIHHPKDSLIKLVTAAGGQVLSRKPKPDSDVTQTINTIAYHARPDS
DQCFCTQYIIYEDLSNYHPERVRQGKVWMAPSSWIIDCVMSFELLPLDSR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaccggcagccgagggtccgctccgggaacgagcctcgtcccgcgcccgcc
atggagcccgcgggtcgcggggcctgggcccacagccgcgccgcgctcggccgcctggag
aagctgctgcgctgctcgcgttgcgctaatattctgagggatcctgtgtgcttaggagga
tgtgaacacatcttttgtagtgattgtgtaagtgactgcattggaaccagatgtccagtg
tgtcataccccagcctggatacaagatgtgaagataaatagacaactggacagcatgatc
caactttgtagtaagcttcgaaatttgctacatgacaggaaacattcagatttgaaagaa
gatacatctaggaaaagtttatttaatgatgcagaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtccgatatgttgtaagtaaaatttcagtgcaaact
cagcctcaagtgatgaaagatgtaaatgctcagcaagcctcaatgtatgaatttgtttcc
gcaactcctcctgtagctgtttctgagagggctaaaaagacttctaaaagatctgagaaa
gaacgaaaaaagaaaactgtagctgaaatcaaccaaaaatggaatttagaagcaataaaa
gaagatggtgaacttgactccaaagaggagtttaaggaaaagctggtgtcctgtcgccca
ccctccgttattgctagtcaccatagggtaaatggtgaaatagacttactagcaagtggc
tccgtgacagagtctcaatgtcttggaaatttaaccgaagtctctttaccattggctgag
caaatagagtctccagacactgagagtaggaatgaagtagggactcctgaggagaaggtc
tgtgaaaattatcttacacctaagaaatctttgccattaggtcataatggaaaacgtggg
tgtcgcaacagactttccagtcccgtttctaagagatgtagaagccacattccgagcacc
agtcgagattttgttaagcaaactgtgctcttagaagacaaaccgtcaagcaaacgtaaa
gttggtgatacactgaggaggaaaaacagaactatattagatgaatccatcactagcctt
tcaccaggtaccccaccctctacattgaatacttcaagttacagaagaatgatgtctagt
tcctcagcaatgaagctgttgcccagtaacctcatggctgcgaagagaaatcatagagga
gagactttgctgcatattgcttctattaagggcgacataccttctgttgaatacctttta
caaaatggaagtgacccaaatgtcaaagaccatgctggatggacaccattgcatgaagcc
tgcaatcatgggcacctgaaggtagtggaactgttgctccagcataaagcattagtaaac
tccaccgggtatcagaacgactcaccgcttcatgatgcggctaagaatgggcatgtggat
atagtcaaactgttactttcctatggagcctccaggaatgctgttaacatatttggtctt
cggcctgtggattatacagacaatgaaaatatgaagtccctattgctgttaccagagaag
aatgaatcatccccaacaagcccttgcttggtgaagaacactgggcagcgcagagatcga
cctcttgtgcttataggcagtgggctttcttcagaacaacagaacatgctcagtgagctt
gctgtaattcttaaggctaaaaagtgtgctgagtttgacagtacagtaactcatgttatt
gttcctggtgatgaagttcaaagtaccctgaagtgtatgcttgggattctcagtggatgc
tggatcatgaaatttgaatgggtgaaagtatgtctaaaaagaaaagtatgtgcacaggaa
gaaaagtatgaaattcccgaaggtccgcagagaagcaggctcaacagagaacagctgttg
ccaagactatttgatggatgctacttctattttgggggaaccttcatacaccacccaaag
gacagtcttattaagcttgtcactgcagcggggggccaggtcctcagtagaaagcccaag
ccagacagcgatgtgactcagaccatcaatacaattgcgtaccatgccagacctgattct
gatcagtgcttctgcacacagtatatcatctatgaggatttatctaattatcacccagag
agggttcggcagggcaaagtctggatggctccttcaagctggattatagactgtgtgatg
tcctttgaattgctccctcttgacagcagatga
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