Lemur catta (Ring-tailed lemur): 123643698
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Entry
123643698 CDS
T08326
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
123643698
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcat04040
]
123643698
Ion channels [BR:
lcat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123643698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
PFF1_TM
RskA_C
Motif
Other DBs
NCBI-GeneID:
123643698
NCBI-ProteinID:
XP_045415310
LinkDB
All DBs
Position
8:58834144..58919903
Genome browser
AA seq
2008 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKNDDENGPKPNSDLEAGKNL
PFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKIA
IKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLE
DFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASMEEHSIEMNRTTNNN
GTFVNETVFEFDWKSYIQDSRYHYFLEGFPDALLCGNSSDAGQCPEGYVCVKAGRNPNYG
YTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAV
VAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAATVTASEHSREPSAAGRLSD
SSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEGN
RLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFEDN
ESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPSNGKMHSTVDCNGVVSLVGGPSVPT
SPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILT
NTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLN
TLFMAMEHYPMTEHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVT
LSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYKDCVCKISSDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCME
VAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHK
GIAYVKRKLYEFIVQAFVRKQKILDEIKPLDDLNNKKDSCMSNHTTEIGKDLDYLKDVNG
TTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEES
KEKLNESSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGRG
KQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTY
IFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRAL
RPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTT
GDRFDINEVNNHTDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAA
VDSRNVELQPQYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVE
TDDQSEYVTSILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFL
AELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDC
DPNKPNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLS
EDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDR
IHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAVI
IQRAYRRHLLKRTVKQASFTYNKNKIKGGANLLVKEDMIIDRINENSITEKTDLTMSTAV
CPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcagctattgagagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aaaaatgatgatgaaaatggcccaaagccaaatagtgacttggaagctgggaagaacctt
ccatttatttatggagacattcctccagggatggtgtcagagcccttggaggacctggat
ccatattatatcaataaaaaaacttttatagtattgaataaagggaaggccatcttccgg
ttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaatagct
attaagattttggtacattcattattcagcatgctaattatgtgcactattttgactaac
tgtgtgtttatgacaatgagtaaccctcccgactggacaaagaatgtagagtacaccttc
acaggaatatatacttttgaatcacttataaaaattattgcaaggggcttctgtttagaa
gattttactttccttcgagatccatggaactggcttgatttcactgtcattacatttgca
tatgtgacggagtttgtggacctgggcaatgtctcagcgctgagaacattcagagttctc
cgagcattgaaaacgatttcagtcattccaggcctgaagaccatcgtgggagccctgatc
cagtcggtgaagaagctctcagatgtcatgatcctgactgtgttctgtctgagcgtgttt
gcactaattgggctgcagctcttcatgggcaatctgcggaataaatgtgtccaatggccc
cccaccaatgcttccatggaggaacacagtatagagatgaatagaactacaaataacaat
ggcacatttgtaaatgaaactgtctttgagtttgactggaaatcttacattcaagattca
aggtatcattatttcctggagggtttcccagatgccctactatgtggaaatagctctgat
gcaggccaatgtccagaaggatatgtgtgtgtgaaagctggtagaaatcccaattatggc
tacacaagctttgataccttcagttgggcttttttgtccctgtttcgactaatgactcag
gacttctgggaaaatctttatcaactgacattacgtgctgctggaaaaacgtacatgata
ttttttgtgctggtcattttcttgggctcattctacctaataaatttgatcctggctgtg
gtggccatggcctatgaggaacagaaccaggccaccttggaagaggcagaacagaaagag
gccgaatttcagcagatgctcgaacagcttaaaaagcaacaggaggcagctcagcaggca
gcaactgtaactgcctcagaacattccagagagcccagcgcagcaggcaggctctcagat
agctcatctgaagcctccaagttgagttccaagagcgctaaggaaagaagaaatcggagg
aagaaaagaaagcagaaggagcagtctggtggggaagagaaagatgaggatgaattccat
aaatccgaatctgaagacagcatcaggaggaaagggtttcgcttctccattgaagggaac
agattgacatatgaaaagaggtactcttccccacaccagtctttgttgagcatccgtggc
tccctattttctccaaggcgaaatagcagaacaagccttttcagctttagagggcgagca
aaagatgtggggtctgagaacgactttgctgatgatgagcacagcacctttgaggataac
gagagccggagagattctttgtttgtgccccgacgacatggagagcgacgcaacagcaac
ctaagtcagaccagtaggtcgtcccggatgctggcagtgtttccatcgaatgggaagatg
cacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcagttcctaca
tcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgacaat
ggaactactactgaaactgaaatgagaaagagaaggtcaagttctttccatgtttccatg
gactttctagaagacccttcccaaaggcaaagagcaatgagtatagccagcatcctaaca
aatacagtagaagaacttgaagagtccaggcagaaatgcccaccctgttggtataaattc
tccaacatattcttaatctgggactgttctccatattggttaaaagtgaaacatattgtc
aacctggttgtgatggacccttttgtggacctggccatcaccatctgcattgtcttaaat
actcttttcatggccatggagcactatcccatgacggaacatttcaataatgtgcttaca
gtaggaaacttggttttcactgggatctttacagcagaaatgtttctgaaaattattgcc
atggatccttactattatttccaagaaggctggaatatctttgatggttttattgtgacg
cttagcctggtagaacttggactcgccaatgtggaaggattatcagttcttcgttcattc
cgattgctccgagttttcaagttggcaaaatcttggccaacattaaatatgctgataaaa
atcattggcaattcagtgggggctctgggaaatctaaccctggtcttggccatcatcgtc
ttcatttttgctgtggtcggcatgcagctctttggaaaaagctacaaagattgtgtctgc
aagatctccagtgactgtgaactgccacgctggcacatgaatgacttctttcactccttc
ctgattgtgttccgtgtgctctgtggagagtggatagagaccatgtgggactgcatggag
gtcgctggtcaagccatgtgccttactgtctttatgatggtcatggtcattggaaaccta
gtggtcctgaacctctttctggccttgcttctgagctcatttagtgcagacaaccttgca
gccactgatgatgataatgaaatgaacaatctccaaattgctgtggatagaatgcacaaa
ggaatagcttatgtgaaaagaaaactatatgaatttattgtacaggccttcgttaggaaa
caaaagattttagatgaaattaaaccacttgatgatcttaacaacaagaaagacagttgt
atgtccaatcatacaacagaaattgggaaagatcttgactatcttaaagatgtaaatgga
accaccagtggcataggaaccggcagcagtgttgaaaaatacattatcgatgaaagtgat
tacatgtcattcataaacaatcctagtcttactgtgactgtaccaattgctgtcggagaa
tctgactttgaaaacttaaacacggaagactttagtagtgaatccgatttggaagaaagt
aaagagaaacttaatgaaagcagtagctcgtcggaaggtagcacggtggacattggcgca
cctgcagaggagcagcctgttgtggaacccgaagaaacccttgagcctgaagcctgtttc
actgaaggctgtgtacaaagattcaaatgttgtcaaatcagtgtggaagaagggagagga
aaacaatggtggaacctgagaagaacgtgtttccgaatagttgaacataactggtttgaa
accttcattgttttcatgattctccttagtagcggtgctctggcatttgaagatatatat
attgatcagcgaaagacaattaagactatgttggaatatgctgacaaggttttcacttac
attttcattctggaaatgcttctaaaatgggtagcatatggctatcaaacatatttcacc
aatgcctggtgttggctggacttcttaattgttgatgtttcattggttagtttaacagca
aatgccttgggttactcagaacttggtgccatcaaatctctcaggacgctgagagctctg
agacctctaagagccttatctcgatttgaagggatgagggtggttgtgaatgccctttta
ggagcaattccatccattatgaatgtgcttctggtttgtcttatattctggctaattttc
agcatcatgggcgtaaatttgtttgctggcaaattctaccactgtattaacaccacaact
ggtgacaggtttgacatcaacgaagtgaataatcacactgattgcctaaaactaatagaa
agaaatgagactgcccgatggaaaaatgtgaaagtaaactttgataatgtaggatttggg
tatctctctttgcttcaagttgccacatttaagggatggatggatataatgtatgcagca
gttgattccagaaatgtggaacttcagcctcagtatgaggaaagtctgtacatgtatctt
tactttgttattttcatcatctttgggtccttcttcaccttgaacctgtttattggtgtc
atcatagataatttcaaccagcaaaaaaagaagtttggaggtcaagacatctttatgaca
gaagaacagaagaaatactataatgcgatgaaaaaattaggatcgaaaaagccgcaaaag
cctatacctcgaccaggaaataaatttcaaggaatggtctttgattttgtaaccagacaa
gtttttgacataagcatcatgattctcatctgtcttaacatggtcacaatgatggtggaa
acagatgaccagagtgaatatgtgactagcattttgtcacgcatcaatctggtgttcatt
gtgctgttcactggagagtgtgtcctgaagctcatctccctccgccattattattttacc
attggctggaatatttttgattttgtggttgtcattctctccattgtaggcatgtttctg
gccgagctgatagaaaagtattttgtgtccccgaccctgttccgtgtgatccgtcttgcc
aggattggccgaatcctacgtctgatcaaaggagcaaaggggatccgcacgctactcttt
gctctgatgatgtcccttcctgcgttgtttaacatcggcctcctgctcttcctggtcatg
ttcatctacgccatctttggaatgtccaactttgcctatgttaagagggaggttggaatt
gatgacatgttcaactttgagacctttggcaacagcatgatctgcctgttccaaatcacc
acctcggctggctgggatggattgctggcacctattctcaacagtggaccacccgactgt
gacccgaataaacctaaccctggaagctcagtcaagggagactgtgggaacccatctgtt
gggattttcttttttgtcagttacatcatcatatcctttctggttgtggtgaacatgtac
atcgccgtcatcctggagaacttcagtgttgctactgaagaaagtgcagagcccctgagt
gaggatgacttcgagatgttctatgaggtttgggaaaagtttgatcccgatgcgacccag
ttcatggaatttgaaaaactatctcagtttgcagctgctcttgaacctcctcttaatttg
ccgcaaccaaacaaactccagctcattgccatggatttgcctatggtcagtggtgaccga
atccactgtcttgacatcttatttgcttttacgaagcgggttctgggagagagtggagag
atggatgctctccgaatacagatggaagagcgattcatggcttccaacccttccaaagtc
tcctatcagccaatcactacaactttaaaacgaaagcaagaggaagtatctgctgttatt
attcagcgtgcttacaggcgccaccttttaaagcgaactgtaaaacaagcttcatttaca
tataataaaaacaaaatcaaaggtggggctaatcttcttgtaaaagaagacatgataatt
gacagaataaatgaaaactctattacagaaaaaactgatctgaccatgtccactgcagtt
tgtccaccttcctatgatcgggtgacaaagccaattgtggaaaaacatgagcaagaaggc
aaagatgaaaaagccaaagggaaataa
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