Lemur catta (Ring-tailed lemur): 123643826
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Entry
123643826 CDS
T08326
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04136
Autophagy - other
lcat04140
Autophagy - animal
lcat04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123643826 (ATG16L1)
04136 Autophagy - other
123643826 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123643826 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123643826 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
lcat03029
]
123643826 (ATG16L1)
Membrane trafficking [BR:
lcat04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123643826 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
123643826 (ATG16L1)
Mitochondrial biogenesis [BR:
lcat03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123643826 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
eIF2A
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
ZapB
Cytochrom_D1
Peptidase_M15_4
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
123643826
NCBI-ProteinID:
XP_045415559
LinkDB
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Position
8:complement(6248326..6289147)
Genome browser
AA seq
607 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDIPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECLELRTKLHDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
HPGSGKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
IVREMELLGKITALDLNPERTELLTCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRV
VFSPDGRYVAAGSAEGALYVWSVLAGKVEKVLSKHHSSSINAVAWSPSGSHVVSVDKGSK
AVLWAQY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgctgacttcccccgctggaagcgccacatctcggaggag
ctgaggcgccgggaccgactgcagaggcaggcgttcgaggagatcatcctgcagtataac
aagttactggaaaagtcagatcttcattcagtgttggcccagaaactacaagctgaaaaa
catgacataccaaacaggcatgagataagccctggacatgatggcacatggaatgacagt
cagctacaagaaatggcccagctgaggattaaacaccaagaagaactgactgaattgcac
aaaaaacgtggagagttagctcagttggtgattgacctgaataaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagagtgtttgcagactatctctgac
cttgagacagagtgcctagaactgcgcactaagcttcacgaccttgaaagagccaaccag
accctgaaggatgaatatgatgccctgcagatcacttttactgccttggaggagaaactg
aggaaaactactgaagagaaccaggagttagtcaccaggtggatggccgagaaagcccag
gaagctaatcgcctgaacgcagagaatgaaaaggactccaggcggcggcaagcccggctg
cagaaagagcttgcagaagcagcaaaggaacctctgccagttgaacaggatgatgacatt
gaagtcattgtggatgaaacctctgatcacaccgaggagacctctcccgtgcgagccatc
agcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggagacgctctgtctcttccttcccagtcccccaggataatgtggacact
catcctggttctggtaaagaagtgagggtaccgactactgcactgtgtgtctttgatgca
catgatggggaagtcaacgctgtgcagttcagtccaggttctcggttactggccacagga
ggcatggaccggagggttaaactttgggaagtgtttggagacaaatgtgaattcaagggt
tccctatctggcagtaatgcaggaattacaagcattgagtttgatagtgctggatcttac
ctcttagcagcgtcaaatgattttgcaagcagaatctggactgtagatgattatcgatta
cggcacacactcacgggacacagtgggaaagtactctctgctaagttcctgctggacaat
gcacggattgtctcaggaagtcacgaccggactctcaaactctgggatctacgcagcaaa
gtctgcataaagacggtgtttgcagggtccagttgcaatgatattgtctgcacagagcag
tgtgtaatgagtggccactttgacaagaaaattcgtttctgggacattcggtcagagagt
atagtccgagagatggagctattggggaagattactgccctggacttaaacccagagagg
actgagctcctgacctgctcccgtgatgacctgctaaaagttattgatcttcgaacaaat
gccgtcaagcagacgttcagtgcacccgggttcaagtgcggctctgattggaccagggtt
gtcttcagccctgatggcaggtacgtggcagcaggctcagctgagggtgccctctatgtg
tggagtgtgctcgcggggaaagtggagaaggttctttcgaagcatcacagctcatccatc
aacgcggtggcgtggtccccctccggctcacatgttgtcagtgtggacaaaggatccaaa
gctgtgctgtgggcgcagtattga
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integrated database retrieval system
