Lemur catta (Ring-tailed lemur): 123643939
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Entry
123643939 CDS
T08326
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
123643939 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcat04040
]
123643939 (SCN9A)
Ion channels [BR:
lcat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123643939 (SCN9A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
123643939
NCBI-ProteinID:
XP_045415821
LinkDB
All DBs
Position
8:58580315..58720194
Genome browser
AA seq
1986 aa
AA seq
DB search
MAMLPPPGPQSFVHFTKQSLALIEQHIAEGKAKEPKEEKKDDEEGPKPSSDLEAGKQLPF
IYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIK
ILVHSLFSMLIMCTILTNCIFMTLYNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEF
TFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQS
VKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRNSLENNETLESVMNTIESEEEFRK
YFYYLEGSKDALLCGFSTDSGQCPEGYTCVKAGRNPDYGYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKEL
EFQQMLDRLKKEQEEAEAIAAAAAEYASIGRGRIMGLSESSSETSKLSSKSAKERRNRRK
KKNQKKLSSGEEKGDDEKLSKSESEENIRRKSVHLGVEGHRRAREKRLSTPNQSPLSIRG
SLFSARRSSRTSLFSFKGRGKDMGSETEFADDEHSIFGDNESRRGSLFVPHRPQERRSSN
ISQASRSPPMLPVNGKMHSAVDCNGVVSLVDGHSALMLPNGQLLPEVIIDKATSDDSGTT
SQKHKKRRSSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHKF
LIWNCSPYWIKFKKFIYFIVMDPFVDLTITICIVLNTLFMAMEHHPMTDEFKNVLVVGNL
VFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIND
DCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIQKGINYVKQTLREFILKAFSKKPKIS
REIKQADLNTNKENYISNRTLAEMSKDHSFHKEKDKISVFGSRMDKYSMEENDCQSFIHN
PSLTVTVPIAPGESDLENMNTEELSSDSESEYSKERLNRWSSSECSTVDNPLPGEGEEAE
AEPVNSDEPEACFTDGCVRRFSCCQVNIESGKGKIWWNIRKTCYRIVEHSWFESFIVLMI
LLSSGALAFEDIYIERKKTIKIILDYADKIFTYIFILELLLKWVAYGYKTYFTNAWCWLD
FLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGSRFPTNQVQNRSECFALMNVSQNVRW
KNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVDKQPIYEYSLYMYIYFVIFII
FGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGN
KFQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQSEYMSDVLYWINVVFIILFTGEC
VLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLSKLIEKYFVSPTLFRVIRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFE
TFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGSPSVGIFYFVS
YIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSKL
SDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLRSQ
MEERFMSANPSKVSYEPITTTLKRKQEDVSAIIIQRAYRRYRLRQNVKNISSIYIKDGDR
DDDLPNKGDMVFDNINENSSLEKTDATSSTISPPSYDSVTKPDKEKYEKDRTEKEDKGKD
GKERKK
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccaggacctcagagctttgtccacttcaccaaacagtctctt
gccctcattgaacaacacattgccgaaggaaaagctaaggaacccaaagaagaaaagaaa
gatgatgaagaaggcccgaagccaagcagcgacttggaggctggcaaacagctgcccttc
atctatggcgacattcctccaggcatggtgtcagagcccctggaggacctggacccctac
tacgcagacaaaaaaactttcatagtattgaacaaagggaaagcaatcttccgtttcaat
gccacacctgctttgtacatgctatctcctttcagtcctctaagaagaatatctattaaa
attttagtacactccttattcagcatgcttatcatgtgcactattctgacaaactgcata
tttatgaccctgtataaccctccagattggaccaaaaatgtagagtacacttttactgga
atatatacttttgaatcacttgtaaaaatccttgcaagaggcttctgtgtaggagaattc
acttttcttcgtgacccatggaactggctggattttatcgtcattgtttttgcgtattta
acagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtattgagagct
ttgaaaactatttctgtaatcccaggcctgaagaccattgtgggggctctgatccagtct
gtgaagaagctgtctgacgtcatgatcctgactgtgttctgtctgagtgtgtttgcactg
ataggactacagctgttcatgggcaacctgaagcataaatgtttccggaattcacttgaa
aataatgaaacattagaaagcgtaatgaataccattgagagtgaagaagagtttagaaag
tatttttattacttggagggatccaaagatgctctcctttgtggtttcagcacagattca
ggtcagtgtccagaggggtacacctgtgtgaaagctggcagaaaccctgattatggctac
acaagctttgacactttcagttgggcctttttagccttgtttcggctaatgacccaggat
tactgggaaaacctttaccaacagacactgcgtgctgctggcaaaacctacatgatcttc
tttgtggtggtgattttcctgggctccttttatctaataaacttgatcctggctgtggtt
gccatggcttatgaagaacagaaccaagcaaacatcgaagaagcgaaacagaaagagtta
gaatttcaacagatgttagaccgacttaaaaaagagcaagaagaagctgaggcaatagca
gcggcagcagctgaatatgcaagtattgggagaggcagaattatgggcctctcagagagt
tcttctgaaacatccaaactgagctctaaaagcgctaaagaaaggagaaacagaagaaag
aaaaagaatcaaaagaagctctccagtggggaagaaaagggagatgatgagaaattgtcc
aaatcggaatcagaggagaacatcaggagaaaaagtgtccaccttggtgttgaagggcat
aggcgagcgcgtgaaaagagattgtctacccctaatcagtcaccactcagcattcgtggc
tccttgttttctgcaagacggagcagcagaacaagtctttttagtttcaagggtcgagga
aaagatatgggatctgagactgaatttgctgatgacgagcacagcatttttggagacaat
gagagcagaaggggctcactgttcgtgccccacagaccccaggagcggcgaagcagtaac
atcagccaagccagtaggtcccccccaatgctgccagtgaacgggaagatgcacagtgcc
gtggactgcaatggtgtggtctccctggttgatggacactcagccctcatgctccccaat
ggacagcttctgccagaggtgataatagataaggcaacttctgatgacagcggtacaacc
agtcaaaagcataaaaaaagacgttccagttcttatctcctttcagaggatatgctgaat
gaccccaatctcagacaaagagcaatgagtagagcaagcatattaacaaacactgtagaa
gaacttgaagagtccagacaaaaatgtccaccttggtggtacagatttgcacacaaattc
ttgatctggaactgctctccatattggataaaattcaaaaagtttatttattttattgta
atggatccttttgtagatcttacaattaccatttgcatagttttaaacacactctttatg
gctatggagcaccacccaatgacagacgaattcaaaaatgtacttgttgtgggaaatttg
gtctttactgggatctttgcagctgaaatggttttaaaactgattgccatggatccatat
gagtatttccaagtaggctggaatatttttgacagccttattgtgactttgagtttagtg
gagctttttctatcggatgtggaaggattgtctgttctgcgatcgttcagactgctccga
gtcttcaagttggcaaaatcctggcccacactgaacatgctgataaagatcattggtaac
tcagtgggggctctgggaaacctcacactggtgttggccatcattgtcttcatttttgct
gtggttggcatgcagctctttggtaagagctacaaagaatgtgtctgcaagatcaatgat
gactgtacgctcccacgctggcacatgaatgacttctttcactccttcctgattgtgttc
cgtgtgctgtgtggagagtggatagagaccatgtgggattgtatggaggtcgctggtcaa
gccatgtgccttattgtttacatgatggtcatggtgattggaaacctagtggtcctgaac
ttatttctggctttattattgagctcatttagttcagacaatcttacagcaattgaagaa
gacactgatgcaaacaacctccagattgcagtggccagaatccaaaagggaataaattat
gtgaaacaaactttacgtgaatttattctaaaagcattttccaaaaagccaaagatttcc
agggagataaaacaagcagatctaaatactaataaggaaaactatatttctaaccgtaca
cttgctgaaatgagcaaagatcacagtttccacaaggaaaaagataaaatcagtgtattt
ggaagcagaatggacaaatactcgatggaagaaaatgattgtcaatcatttattcataat
cccagcctcacagtgacagtgccaattgcacctggggaatctgatttggaaaatatgaat
actgaggaacttagcagtgattcagagagtgaatatagcaaagagagattgaaccgatgg
agttcctcagagtgcagcacagttgacaaccctctgcctggagaaggagaagaagcggag
gctgaacctgtgaattcagatgagccagaggcctgttttacagatggttgtgtgcggagg
ttctcatgttgccaagttaacatagagtcagggaaaggaaaaatctggtggaacatcagg
aaaacctgctacaggatagttgaacacagttggtttgaaagcttcattgttctcatgatc
ctgcttagcagtggtgctctggcttttgaagatatatatatcgaaaggaaaaagaccatt
aagattatcctggattatgctgacaagatattcacttacatcttcattctggaattgctt
ctaaaatgggtagcctatggttataaaacgtatttcaccaatgcctggtgttggctggat
ttcttaattgttgatgtttctttggttactttagtcgcaaacactcttggctactcagat
cttggccccattaaatcccttcggacccttagagctttaagacctctaagagccttatct
agatttgaagggatgagggtggttgtgaatgcactcataggagcaattccttccatcatg
aatgtgctacttgtgtgtcttatattctggctaatatttagcatcatgggagtaaatttg
tttgctggcaagttctacgagtgtgttaacaccacagatgggtcacgcttccctacaaat
caagttcaaaatcgctccgagtgttttgcccttatgaatgttagtcaaaatgtgcgatgg
aaaaacttgaaagtgaactttgataatgttggactcggttacctatctctgcttcaagtt
gcaacatttaagggatggatggacattatgtatgcagcagtcgattctgttaatgtagac
aagcagcccatatatgaatacagcctctacatgtatatttattttgtcatctttatcatt
tttgggtcattcttcactttgaatttgttcattggtgtcatcatagataatttcaaccaa
cagaaaaagaagcttggaggtcaagacatctttatgacagaagaacagaagaaatactat
aatgcaatgaaaaagttggggtccaagaaaccacaaaagccaattcctcggccagggaac
aaattccaaggatgtatttttgacctggtaacaaatcaagcttttgatatcaccatcatg
gttctaatctgcctcaacatggtaaccatgatggtagaaaaggagggacaaagtgaatat
atgagtgatgttttatactggataaacgttgtttttattatccttttcactggagaatgt
gtgctaaaactgatctccctcagacactactacttcaccataggatggaacatttttgat
tttgtggttgtgattctctccattgtaggtatgtttctttccaagctgatagaaaagtat
tttgtgtccccgaccctgttccgtgtgatccgtcttgccaggattggccgaatcctacgt
ctgatcaaaggagcgaaggggatccgcacgctgctctttgctctgatgatgtcccttcct
gcgttgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttgga
atgtccaactttgcctatgttaaaaaggaagctggaattaatgacatgttcaactttgag
acttttggcaacagcatgatctgcctgttccaaatcaccacctcggctggctgggatgga
ttgctggcacctattctcaacagtgcgcctcccgactgtgacccaaaaaaggttcaccct
ggaagttcagttgaaggagactgtggtagcccatctgttgggatattttattttgtcagt
tacatcatcatatcctttctggttgtggtgaacatgtacatcgccgtcatcctggagaac
ttcagtgttgctactgaagaaagtaccgagcctctgagtgaggatgactttgagatgttc
tatgaggtttgggagaagtttgatcctgatgcaactcagtttatagaatatagcaaactc
tctgattttgcagctgctctggatcctcctcttctcatagcaaaaccaaacaaagttcag
ctcattgccatggatctgcccatggtcagtggtgacaggatccactgccttgacatctta
tttgcttttacaaagcgtgttttgggtgagggtggagagatggattctcttcgttcacag
atggaagaaaggttcatgtctgcaaatccttctaaagtgtcctatgaacccatcacaact
acacttaaacgaaaacaagaggatgtgtctgctattatcattcagcgtgcttacagacgt
taccgcttacggcaaaatgtcaaaaatatatcaagcatatacataaaagatggagacaga
gatgatgatttgcccaataaaggagatatggtgtttgataacattaatgagaactcaagt
ctagaaaaaacagatgcaacttcttccaccatctctcctccttcatatgacagcgtaaca
aagccagacaaggagaaatatgaaaaagacagaacagaaaaggaagacaaagggaaagat
ggcaaggaaagaaaaaagtag
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integrated database retrieval system
