Lemur catta (Ring-tailed lemur): 123643949
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Entry
123643949 CDS
T08326
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcat04990
]
123643949 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
lcat04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
123643949 (SNED1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
cEGF
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
123643949
NCBI-ProteinID:
XP_045415851
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All DBs
Position
8:complement(972381..1039869)
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AA seq
1424 aa
AA seq
DB search
MPRGAAWALLVAAALGLGARGARGAVALADFYPFGPERGDAATPKQDDGGSGLRPLSVPF
PFFGAQHSALYVNNNGVISFLKEVSQFTPAAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
TTDLATLRRATEDVRHYFPELPGFSATWVFIATWYRVTFFGGSSASPVNTFQTVLITDGK
FSFTIFNYESIAWTTGTHASSGGNATGLGGIAAQAGFNAGDGQRYFSIPGSRAADVAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLALRPCLNGGKCIDDCVTGNPSYTCSCL
SGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFSCRCPAGFGGPTCETAQSPCDTQECQN
GGQCQAESGSAVCVCQAGYTGAACETEMDECSSDPCLNGGSCVDLVGNYTCLCAEPFEGP
HCETGSQRVPDACLSAPCQNGGTCVDGDQGYVCECPEGFMGLDCRDRIPNSCECRNGGRC
LGTNTTLCQCPPGFFGLLCEFEVTAMPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNASHS
LPSPCDSDPCFNGGSCDAQDDSYTCACPRGFHGRHCEKARPHLCSSGPCRNGGTCKEAAG
EYHCSCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCVNGGTCEDLGSDFSCHCQAGYTGRRCQAEVDCGPPEEVKHATLRFNSTRPGSVA
LYACDHGYRLSTPSHVRVCQPQGIWSEPPQCLETDECQAQPCGNGGSCRDLPGAYVCQCP
AGFVGVHCETEVDACDSSPCQHGGRCENGGGAYLCACPEGFFGYHCEIVGDPCFSSPCGG
RGYCLASNGSHSCTCKVGYTGRDCATELFPPTALTVDSVEETWVSISWRPPDGPAARQVL
DGYAVTYVSADGSYRRTDFVDRGRSSHQLRALVPGRAYNISIFSVKRNANNKNDISRPAV
LLTRTRPRPVASVEVTNTTAGAISARWALHRVQHASASRVRASIRHAEASQRRSTDVDKS
VDSFTFGALLPGRRYTIQVTTLSGLSGEGQPTESLATAPVHVWTRPLPPANLTATRVTAT
SAHVVWDAPMPGALLEAYVINVTTSQSTKSRYVPNGKLVSYTVRDLLPGRRYRLSVTAVQ
STEHGQLHSEPALLYIVTSPGDGTHRRWHQGGHHPRALRNRPPLVHLPELRLLNDHGAPE
MPTQRPRFSELVDGRGRVSARFGSSPSRPVPTQSQPTVLAQLENMQETPTQVSLALHLPE
RSDKDINNAPGNCSENPCQNGGTCVPGAGTHSCDCGPGFKGRRCELACRKVPRPCTRLFS
ETKSFPVWEGGVCHHIFHSFFQNAAATLGTMQHLESHGWRTFTCGCPMLSTRRGGPRSFT
AICYELSENICHNDLHTPSKLSCRPTSITVCLWFWTVSLRCAWL
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcggcgcagcctgggcgctgctggtggccgcggccctggggctgggggcgcgc
ggggcgcgcggcgcggtggccctcgccgacttctacccgttcggcccggagcgcggcgac
gccgccacccccaagcaggacgacggcggctcggggctgcggccgctctccgtgcccttc
ccgttcttcggcgcccagcactccgcgctctacgtgaacaataacggagtcatctccttc
ctgaaggaggtctctcagttcaccccggcagccttccccatcgccaaggaccgctgcgtg
gtggccgccttctgggcagatgtggacaaccggcgcgcaggcgacgtctactaccgggag
accaccgacctggccacgttgcgccgggccacggaggacgtcaggcactacttccctgag
ctcccgggcttctctgccacctgggttttcatcgccacctggtaccgagtgaccttcttt
ggaggcagctctgcttcccctgtcaacacattccagactgtgctcatcacggacggcaag
ttctccttcaccatcttcaactatgagtccatcgcgtggaccacgggcacacatgccagc
agtgggggcaatgccactggcctggggggcatcgcagcccaggccggcttcaacgcgggc
gacgggcagcgctacttcagcatccccggctcccgcgcggcggacgtggccgaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgttcagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctccgtgtgcctggccctgcgcccctgcctcaac
ggcggcaagtgcatcgacgactgtgtcaccggcaacccctcctacacctgctcctgcctt
tcgggcttcacagggcggaggtgccacctggatgtgaacgagtgtgcttcccacccatgc
cagaacggcgggacctgcacccacggtgtcaacagcttcagctgccggtgcccggccggc
ttcgggggacccacctgtgagacagcccaatccccctgtgacacccaagagtgtcaaaat
ggcggccagtgccaggcagagagcggctctgcggtgtgtgtgtgccaggctgggtacacg
ggggcagcctgcgagacggagatggacgagtgcagctctgacccctgcctgaacggaggc
tcctgcgttgacctggtggggaattacacctgcttgtgcgcagagcccttcgagggacct
cactgtgagacaggaagccagcgcgtgcctgacgcctgcctctcggccccctgccagaac
gggggcacctgtgtggacggggatcagggctacgtgtgcgagtgccccgaaggcttcatg
ggcctggactgcagggacagaatccccaacagctgcgagtgccgcaacggaggccgatgc
ctgggcaccaacaccaccctctgccagtgccccccgggcttcttcgggctcctctgtgag
ttcgaagtcacggccatgccctgcaacatgaacacgcagtgcccggacgggggctactgc
atggagtacgggggcagctacctctgcgtctgccacaccgaccacaacgccagtcactcc
ctgccgtcgccctgcgactcggacccctgcttcaacggaggttcctgcgacgcccaggac
gactcctacacgtgcgcgtgcccgcgggggttccacggcaggcactgcgagaaagcccgg
ccacacctgtgcagctcggggccctgccgcaacgggggcacgtgcaaggaggcagccggc
gagtaccactgcagctgcccctaccgcttcaccgggaggcactgtgagatcgggaagcca
gactcctgcgcctccggcccctgtcacaacggtggcacctgcttccactacatcggcaaa
tacaaatgcgactgtcccccgggcttctctggccggcactgcgagatagccccctccccc
tgcttccggagcccgtgtgtgaacgggggcacctgcgaggacctgggctccgatttctcc
tgccactgccaagcagggtacacgggacgccggtgccaggcagaggtggactgcggcccc
cccgaggaagtgaagcacgccacgctgcgcttcaacagcacgcggccaggctcggtggcc
ctgtacgcgtgtgaccatggctacaggctgagtacccccagccacgtgcgggtctgccag
ccgcagggtatctggagtgagcctccccagtgcctcgagacggacgagtgccaggcgcag
ccctgcgggaacggaggctcctgcagggacctccctggggcctacgtctgccagtgcccg
gcaggcttcgttggcgtccactgcgaaacagaggtggacgcctgcgactccagcccctgc
cagcacgggggccgctgcgagaacggcggcggggcctacctgtgcgcctgccccgagggc
ttcttcggctaccactgtgagatagtgggggacccctgcttctccagcccctgtgggggc
cgcggctactgcctggccagcaacgggtcccacagctgcacctgcaaagtcggctacaca
ggcagggactgcgccacagagctcttcccgccaactgctctcacggtggacagcgtggag
gagacgtgggtctccatctcctggcgccctcccgacggcccggctgccaggcaggtgctc
gatggctacgcggtcacctacgtctctgccgacggctcctaccgccgcacggacttcgtg
gacaggggccgctcctcgcaccagctgcgggccctggtgccgggcagggcctacaacatc
tccatcttctcggtcaagcgcaacgccaacaacaagaacgacatcagcaggccggccgtg
ctgctcacccgcacacgaccccgccctgtggcgagcgtggaggtcaccaacacgacggcc
ggcgccatctcggcgcggtgggctctgcaccgggtccagcacgcctccgccagccgggtc
cgcgcatccatccgccacgccgaggcctcccagcgccggtccacggacgtggacaagagt
gtggacagcttcacatttggggccctgctgccaggaaggagatacaccatccaggtgacc
accctcagtgggctcagcggagaggggcagcccaccgagagcctggccaccgcaccggtg
cacgtgtggacccggcccctgcctcctgcaaacctgaccgccacccgcgtcacggccacc
tctgcccacgtggtctgggacgcccccatgccaggcgccctgctggaggcctacgtcatc
aacgtgaccaccagccagagcaccaagagccgctacgtccccaacgggaagctggtgtcc
tacacagtgcgcgacctgctgccagggcggcggtaccggctgtcagtgacggccgtgcag
agcacggagcacggccagctgcacagcgagcccgccctcctctacatcgtcacctccccc
ggggatggcacccaccgacgctggcaccagggaggacaccacccgcgggcgctcagaaac
agaccgcccctggtgcacctgccggagctgcgcctcctgaatgaccacggtgcccccgag
atgccaacccagcggcccaggttctcggagctcgtggacggcagaggcagagtgagcgcc
aggttcggcagctcacccagcagaccggtccccacacaatcacagcccacggtcctggcg
cagctggagaacatgcaggagacccccacgcaggtcagcctggccctccacctccctgaa
cgcagtgacaaggacatcaacaatgccccggggaactgctcggaaaacccctgtcagaac
gggggcacctgtgtgccgggcgccggcacccacagctgcgactgcgggccggggttcaaa
ggcaggcgctgcgagctcgcctgcaggaaggtgccccggccctgcacgcggctcttctcc
gagacaaagtcctttcccgtctgggagggaggcgtctgtcaccacatttttcattccttc
ttccaaaacgcggctgccacactcgggacgatgcagcacttggaaagccatggctggagg
acgttcacctgcggctgccccatgctcagcacccgccgtggtggccctcgttctttcact
gccatctgctatgagctttcggaaaacatttgtcacaacgaccttcacacaccttcaaaa
ctcagctgccgtcccactagcataaccgtttgtctctggttttggacagtttcattacga
tgtgcttggctgtag
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