Lemur catta (Ring-tailed lemur): 123644098
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Entry
123644098 CDS
T08326
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04151
PI3K-Akt signaling pathway
lcat04382
Cornified envelope formation
lcat04510
Focal adhesion
lcat04512
ECM-receptor interaction
lcat04820
Cytoskeleton in muscle cells
lcat04926
Relaxin signaling pathway
lcat04933
AGE-RAGE signaling pathway in diabetic complications
lcat04974
Protein digestion and absorption
lcat05146
Amoebiasis
lcat05165
Human papillomavirus infection
lcat05200
Pathways in cancer
lcat05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123644098 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123644098 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123644098 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123644098 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
123644098 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
123644098 (COL4A3)
09158 Development and regeneration
04382 Cornified envelope formation
123644098 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123644098 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
123644098 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123644098 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
123644098 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123644098 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcat04147
]
123644098 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
lcat00536
]
123644098 (COL4A3)
Exosome [BR:
lcat04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123644098 (COL4A3)
Glycosaminoglycan binding proteins [BR:
lcat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123644098 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123644098
NCBI-ProteinID:
XP_045416231
LinkDB
All DBs
Position
8:complement(10406969..10531720)
Genome browser
AA seq
1898 aa
AA seq
DB search
MPHLAKAVRGTRKGKSRLEDGPDTPELRICPQGHRRKSALLGETPARKCPGCQAGNSSLQ
INENTAPSSNPGAQTREPEELFSGGPRVTAPGPAAAPEHRASSTAPSQAGVPGPQPAGAL
PRRDTSAWPRSTRAPPPPRRALTASPATAGPRRGGERKSPQSARGASRTRTPARLPLNAG
RAAGHSLPPCGHLPSAAPKSPHLRLARLYPTCVPGPRELHLLRRSPWIRAHLPRRNPALS
RLPGTPPGSKGHCLGCVCKDKGRCFCDGAKGDKGERGFPGPPGSPGQKGFPGPEGFPGPQ
GPQGSPGLPGRTGSKGARGVTGLPGFSGPPGLPGIPGHAGPYGLAGLPGCNGSKGEQGFP
GLPGTPGYPGIPGAAGLKGQKGTPAKGEEMELNAKGDPGLPGMPGSQGLPGPRGFPGPAG
PPGPPGFTGFPGAMGPTGPKGHMGDNMIGQKGEQGVKGLTGPPGPPGTVIVTFTGPENRT
ALKGEKGDKGAMGKPGPPGPSGTPGESYRSEKGAPGEPGPQGKPGKDGAPGFPGGEGAKG
SRGFPGLPGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDKGIPGPPGPRGARGPQGPSG
PPGVPGSPGPSRPGLRGTPGWPGLKGSKGERGPPGQNAVGPPGSPGCPGAPGPTGPPGPP
GLPGDIVFLRGPPGDQGLPGYLGAPGIPGVDGPKGDPGLPCTQCPCIPGPPGLPGLPGLH
GVKGIPGGQGAAGAKGSPGSPGSAGLPGFPGFPGARGDPGLKGEKGETPLPEGQVGAPGE
PGLRGHPGRKGLDGIPGTPGVKGLPGPKGEPAPRREKKEQGPPGHPGSPGSPGPAGPAGP
AGPPGYGPRGEPGPKGTQGLPGAPGPPGEAGPRGEFSVSTPVPGPPGPPGPPGHAGSRGP
PGIPGSMGKCGDPGLPGPDGEPGISRIGFPGPPGPKGDRGFPGTKGSLGSPGKMGEPGLP
GEPGPPGPKGEPALAMPGEPGTPGFPGERGNSGENGEIGLPGLPGLPGTPGNEGLDGPRG
DPGQPGPPGEKGRPGRCIDGPRGDPGLPGLNGLKGQEGRRGETGPKGDPGIPGLDRSGFP
GAPGPPGMPGHPGAMGPPGQKGYPGNPGFVGPPGENGAVGMLGYPGATGPPGPPGNPGVP
GHRGSPGIPGVRGNRGHPGAKGDPGDKGNPGPSQITHLKGDKGEPGLKGFAGYPGEKGNR
GIPGLPGLKGLKGLHGTPGPPGPRGDLGSIGSPGEPGPRGMPGSVGNMGVPGSKGKRGTL
GFPGQAGRPGLPGIRGLQGDKGEPGYSEGTRPGPPGQTGEPGLPGEMGKKGERGPPGPPG
HSGPAGAEGSPGSSGSPGHPGKPGLDGDLGNKGIKGFPGLPGIKGLPGLPGFPGSPGPVG
VRGSQGHDGIPGPPGEKGETGLLGVHPGPRGSPGAQGAKGDRGVPGLPGPPGRKGPGGDV
GPPGPTGIEGLPGPPGLPGAIIPGQKGNRGLPGSRGNPGEPGPPGPPGSHVKGIKGEKGF
MGQPGRKGLPGTVGDIGLPGHPGAPGTPGLPGLRGDPGFYGFPGIKGEKGNPGFPGSIGP
PGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGPPGDPGMQGEPGPPGPPGSLGPCGPRGK
PGKDGKPGTPGPAGEKGNKGSKGEQGPPGLDGLPGLKGKPGEIGSPATRTMRGFVFTRHS
QTTVIPSCPEGTEPLYSGFSLLFVQGNERAHGQDLGTLGSCLQRFTTMPFLFCNVNNVCS
FASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAIAIAVHSQTTDIPSCPQ
GWISLWKGFSFIMFTSAGSEGAGQALSSPGSCLEEFRASPFLECHGRGTCNYYSNSYSFW
LASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKRH
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgccacacctagccaaagcagtccgtggcacgagaaaaggcaagagccggctggaagac
ggccctgacactccagagctgcgtatctgcccccaaggccaccgcaggaagagcgctctc
cttggggagacacctgcccggaagtgcccaggctgccaggccggtaactcgagcctccaa
attaatgaaaacacagcgcccagttcaaacccaggcgcacaaactcgggagccggaggag
ctcttctccggtggcccccgagtcacagctcccggcccggccgccgcccctgaacaccgc
gcctcctccaccgcgccctcccaggcaggggtcccgggcccccagcctgcgggcgcctta
cctcggcgggacacctcagcctggcccagatccacccgcgccccgccgcctcctcgccgc
gctctcacggcctcgcccgcgacggcaggtccgcggcgcggaggcgaaaggaagagcccc
cagagcgcaagaggggcctcgcgcacgcggacgcccgcgcgcctcccgcttaatgcgggc
agggccgctggccactccctccctccgtgcggccacctcccctcagccgcccccaagagc
ccccacctccgacttgcacgcctctaccccacctgcgtcccgggacctcgggagcttcac
cttcttcgccgctcaccctggattcgcgcccacctgccccgcaggaacccagccctttct
cgcctcccgggcacgccgcccgggtcgaagggacactgcctgggctgtgtctgtaaagac
aaaggccggtgcttctgtgatggggccaaaggagacaagggggaaagaggttttcccgga
ccccctggttctcctggccagaaaggattcccaggtcctgaaggcttccctggaccccag
ggaccccagggctctccaggacttccaggacgcactggttccaaaggtgcaaggggagta
actggattaccaggattttctggtcctcctggacttccaggcatcccgggccacgctggg
ccttatgggcttgccgggttgccaggatgcaatggttctaagggtgagcaagggtttcca
ggacttccagggacaccaggctacccagggatcccaggtgctgctggtttgaaaggacaa
aagggcactcctgctaaaggagaagaaatggaacttaatgcaaaaggtgacccagggttg
ccagggatgccaggatctcagggtttgccaggccctcgaggttttcctgggcctgccggc
ccacctggccccccaggattcactggctttccaggagccatgggacctacaggacctaag
ggtcacatgggcgacaacatgataggacagaaaggagagcagggtgtgaaaggattaaca
ggaccccctggaccgccaggaacagttattgtgacctttactggcccagaaaacagaacg
gccctcaagggggagaagggagacaaaggagcgatgggcaaacctggacctcctggaccc
tcaggaacgcctggggaatcgtacagatctgaaaagggtgctccaggagaacccggccca
cagggaaaacctggaaaagatggggcccctggcttccctggtggtgagggagccaagggc
agcaggggcttccccgggctaccgggtgaagacggcattaagggatggaaaggggacatt
ggccctccaggatttcgtggtccaacagaatattatgatgcataccaggaaaagggagat
aaaggaattccaggcccaccagggcccagaggagctcgaggcccccagggtcctagtggt
ccccctggagttcctggaagtcctggaccatcaaggcctgggctcagaggaacccctggg
tggccaggcttgaaaggaagcaaaggggaacgcggtcccccgggacagaatgcagtgggg
cctccggggtctccgggttgtcctggtgcaccaggccctacaggaccaccggggccacca
ggactaccaggtgacatcgtttttctcaggggcccacctggagatcagggactgcccggc
tatctaggggctccaggaatcccaggagttgatgggcccaaaggagacccgggcctgcca
tgcacacagtgcccttgtatcccagggcctcccggcctcccaggactgccggggctgcat
ggtgtaaaaggaatcccaggagggcaaggtgcagctggtgcgaaaggaagcccggggtcc
ccaggaagtgcaggtcttccaggatttccagggttcccaggtgctcggggtgatccagga
cttaaaggagagaaaggtgaaactcctctgcctgagggacaagtgggtgcccctggggaa
ccggggctcagagggcatcccgggagaaagggcttggacggaattcctggaactccggga
gtgaaaggattaccaggacctaaaggcgaaccggcaccacgtcgtgagaagaaagaacag
ggtcctccaggccatcctggctcccctgggtccccaggacctgcaggaccagctggacca
gctgggccacctggctatggaccccggggggagcctggtccaaagggcacccaaggactt
cctggagcccctggaccacccggagaagccggtcctaggggagaattcagtgtgtcaaca
ccagttccgggccccccagggcctccagggccccctggccatgccggctcccgaggtcca
cctggcatccctggatccatggggaagtgtggtgatcctggtcttcccgggcctgatggt
gaaccaggaatttcaagaattggatttcctgggcctcctggacctaagggagaccgaggt
tttccaggaacaaaaggatcactgggttctcctggaaaaatgggagagcctgggttacct
ggagagccaggacccccaggacccaagggagaaccagcactagccatgcctggagaacca
ggaacaccaggttttccgggagaaagaggcaattctggggaaaatggagaaattggactc
cctggacttccaggtctccctggaactccaggaaatgaagggcttgatggaccacgagga
gatccagggcagcctggaccacctggagaaaaaggccgcccaggaaggtgcatagacggt
cccaggggagacccaggacttccaggattaaatggattgaaagggcaagaaggcagaaga
ggtgaaacagggccaaagggagacccggggattccgggcttggataggtcaggatttcct
ggagcacctggaccaccaggaatgccgggtcatccaggcgccatgggaccacctggtcaa
aaaggatatccaggaaacccaggatttgtagggccaccaggtgaaaatggagctgtcggg
atgctgggctatcccggagccactggccccccggggccacctgggaacccgggcgtccca
gggcacaggggtagccctggaattccaggagtaaggggcaacagaggacacccaggagca
aaaggggacccaggagacaaagggaatccggggccttctcagataacccatttaaagggg
gacaaaggagaaccgggtctaaaaggatttgcaggatatccaggtgagaaaggaaacaga
ggcattccagggttgccaggtttaaaaggcctcaaaggactacatgggacaccaggacca
ccaggccccagaggagatctgggcagtattgggagtcctggagaaccaggaccacgtggc
atgccaggaagcgtggggaacatgggtgtaccaggttctaaaggaaaaaggggaactttg
ggatttccaggacaagctggaagaccaggtctcccaggtattcgtggtctccaaggagac
aagggagagccaggttattcagaaggtacaaggccaggaccaccaggacaaacgggggaa
ccaggattgccaggtgagatgggaaagaaaggagaaagagggccacctggcccacctgga
cattcggggcctgctggagctgagggatcccccggaagttctggaagtcctggccaccca
ggaaagccgggtcttgatggtgatttgggtaataaaggaatcaaaggcttcccgggcctt
ccaggaataaaaggcctcccaggtcttccaggattccccggatctcctggaccagtgggt
gtaagaggtagccaaggacacgatggaattcctggtccacctggagaaaagggagaaaca
ggtttactgggggtacacccaggcccaagagggagccctggtgctcaaggagccaaagga
gacaggggagtcccaggcttgcccggccccccaggcaggaaagggccagggggagatgtg
gggcctccagggcccactggcatcgaaggactcccagggccgccaggtttgcccggtgca
atcatccctggccaaaaaggaaatcgaggtctgccaggctctagaggaaacccaggtgag
ccaggtcctcctggacctccagggagtcacgtaaaaggcataaaaggagaaaaagggttt
atgggccagcctggccgaaaaggtctacctggaactgtaggagacatagggctaccaggt
catccgggagcaccaggtaccccaggtcttccagggctcagaggtgatcctggattctat
gggtttccaggcataaaaggagagaaaggtaatccaggatttcctggatcaattgggcct
ccagggccaattggaccaaaaggaccacctggtgtacgtggagaccctggcacacttaag
atcatctcccttccaggaagtccagggccacctggcccacctggcgatccagggatgcaa
ggagaacctgggccaccagggccacctggaagcttaggaccttgtgggccaagaggtaaa
ccaggcaaggatggaaaaccaggaactcctggaccagctggagaaaaaggcaacaaaggt
tctaaaggagagcaaggaccacctggattggatggattgccaggtttgaaaggaaaacct
ggagaaattggatcacctgcaaccagaacaatgagaggctttgtcttcacccgacatagt
caaacaacagtgattccttcatgtccagaagggacggagccactgtacagcgggttttct
cttctttttgtacaaggaaatgaaagagcccatggacaagaccttggaactcttggcagc
tgcctgcagcgatttaccaccatgccgttcctattctgtaatgtcaacaatgtatgtagt
ttcgcatctcgaaatgattattcttactggctgtcaacaccagctctgatgccaatggac
atggctccgattactggcagggccctcgaaccttatattagcagatgcactgtctgtgaa
ggcccggccattgccatcgctgttcacagccaaaccactgatattccttcatgtccccaa
ggctggatttctctctggaaaggattttctttcatcatgttcacaagtgcaggctctgag
ggcgctgggcaagcactgtcatcccctggctcctgcttagaagaattcagagccagtcca
tttctagaatgtcatggaagaggaacatgcaactactattcaaattcctacagtttctgg
ctggcatcgttaaacccagaaagaatgttcagaaagcctattccatcaactgtgaaagct
ggggaattagaaaaaataataagtcgctgtcaggtgtgcatgaagaaaagacattga
DBGET
integrated database retrieval system
