Lemur catta (Ring-tailed lemur): 123644585
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Entry
123644585 CDS
T08326
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123644585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123644585
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123644585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
123644585
NCBI-ProteinID:
XP_045416714
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All DBs
Position
9:62833738..62872467
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AA seq
726 aa
AA seq
DB search
MIGGKEIEVMGIISPDDFSSGRCFQCGVGSPAIQSSSQASRKCFSNPFKSVCKPSSKEDR
ENDFQNCKPRHDPYTPNSLVMPRPDKNHQWMFNKNCFPLVEVVIDPHLVYHLRPHQKEGV
IFLYECVMGMRMNGKYGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPG
SLVNNWRKEFQKWLGSERIKVFTVDQDHKVEEFIKATFYSVLIISYEMLLRSLDQIKNIK
FDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGS
LSSYRKIYEEPIILSREPSASEEEKELGERRATELTCLTGLFILRRTQEVINKYLPPKIE
NVVFCRPTALQIELYRKLLNSQAVRFCLQGLLENSPHLICIGALKKLCNHPCLLFSSIKE
RECNSTCDDNEERSLYEGLLNVFPADYSPPQFTEKESGKLQVLLKLLAVIHELRPTERVV
LVSNYTQTLNILQEVCKRHGYAYRRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGG
VGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQIS
KQGLSGAVVDLNKTSEHIQFSVEELKNLFTLHESSCCVTHDLLDCECTEEKDHTGDSCEK
FTLSRHCQLGPHHQKSDSLKPLSMSQLKQWKHFPGDYLNLTDPFLERIRENVSFFFQNIT
NQATAK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgattggtggaaaagaaatagaagtcatgggtataatctctccagatgacttcagcagt
ggcaggtgttttcagtgtggagtaggaagtcctgctatccaaagttcttctcaggcttcc
aggaagtgtttctctaaccctttcaaaagtgtctgtaaaccaagttcaaaggaagataga
gagaatgatttccaaaattgcaaaccacgccatgatccatatacaccaaattcccttgtt
atgccacgaccagacaagaatcatcagtggatgttcaataagaactgtttccctcttgtg
gaggtagtgatagatcctcaccttgtatatcatcttcgaccacatcagaaagaaggagtc
atattcctttatgaatgtgtgatgggaatgagaatgaatggcaaatatggagctattctt
gctgatgaaatgggtttagggaaaacattgcaatgtatctcgctcatctggaccctacag
tgtcagggaccctatggaggcaagccagtaataaagaagacacttattgtcacacctgga
agcttggtaaataattggaggaaagaatttcaaaaatggctgggaagtgaaaggatcaag
gtatttactgtagatcaggaccacaaagttgaagaattcatcaaagctaccttttattct
gttcttatcatcagttatgaaatgttactccgttccctggatcaaattaagaatataaaa
ttcgatcttctaatctgtgatgaggggcatcgtttgaagaatagtgccattaagacaact
acagccctcattagcctctcctgtgagaaaagaataattctaactggtactccagttcag
aatgatctgcaagaattttttgcattaatagattttgtaaatccaggaatattaggctct
ttgtcatcttacaggaaaatatatgaagaacccatcattttatcgagagaaccttctgct
tctgaggaagagaaggagttaggagagagaagagcaactgaacttacttgcctcactgga
ctctttattcttagaagaacccaagaagtcataaataaatatcttccccctaaaatagag
aatgtagtcttttgccggccaacagcactacagattgagctttatcgaaaactgttgaat
tctcaggctgtcaggttctgtcttcaagggttgttggaaaatagtcctcatctaatatgt
ataggagctcttaaaaaactgtgcaatcatccatgccttttattcagctctataaaggaa
agagaatgtaactcaacttgtgatgacaatgaagaaaggagtctatacgaaggcttgcta
aatgtgtttccggctgattacagccctccccagtttactgagaaggagtcaggaaaacta
caggtgctcttaaagctcttagcagttatccatgaacttcgacctactgagagggtggta
ttggtatccaactatacacaaactttgaatattttacaagaagtgtgcaagcgtcatgga
tatgcttatagaagacttgatggacaaacgccaatctctcaaaggcagcaaattgttgat
ggctttaatagtaaatactcttctgattttatttttttgttaagttcaaaagctggtggt
gtgggacttaaccttataggaggatctcacttaattctctatgacattgattggaatcca
gccactgatatccaggcaatgtctagagtatggagagatggtcagaaacatcctgtacat
atttacagactcctaaccacaggtacaatagaagaaaaaatctatcaaaggcagattagt
aagcaaggtctttctggggccgttgtagacctaaacaagacatctgaacatattcagttt
tctgtagaagaacttaaaaatttgtttacattacatgaaagttcatgttgtgtaactcat
gacctgcttgactgtgagtgcacagaagaaaaagatcatacaggtgattcgtgcgaaaaa
ttcactctctctagacattgtcagcttggtccacatcaccagaaatctgactccctgaaa
cctctttctatgtcccagctgaagcagtggaaacattttcctggagattatttaaatctt
acagatccttttcttgaaagaataagagaaaatgtgtcattcttttttcagaatataacc
aatcaagcaactgccaaataa
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