Lemur catta (Ring-tailed lemur): 123645240
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Entry
123645240 CDS
T08326
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123645240 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123645240 (CPSF2)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123645240 (CPSF2)
U7-dependent histone pre-mRNA processing factors
123645240 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
123645240
NCBI-ProteinID:
XP_045417882
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All DBs
Position
1:complement(11530363..11558582)
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AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDIEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattgaccaccctctctggggtccaagaagaatctgctctttgc
tatcttctccaagttgatgagtttagatttttattggactgtggctgggatgagcatttt
tctatggatattatagattccctgaggaaacatgttcaccagatcgatgcagtgctactg
tctcaccctgatcctctccatcttggtgccctcccgtttgctgtcgggaagctgggtctg
aactgtgctatctatgcaaccattcctgtttacaaaatgggacagatgttcatgtatgat
ctttatcagtctcgacacaatacagaagactttacactctttacattagacgatgtggat
gcagcctttgataaaatacagcagctaaaattctctcaaattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctgccagccggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgttaagcagaccctccctacttatcaca
gattcatttaatgctacatatgtgcagcctagaagaaaacagagagatgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtattaatagcagtggacacagca
ggcagagttttggaacttgctcaacttcttgatcaaatttggagaactaaagatgcagga
ttgggtgtttactcattggcactcctaaataatgtcagttataatgtggtggagttttct
aagtcccaggtagagtggatgagtgacaaattgatgagatgttttgaagacaaaagaaat
aatccgtttcagtttcgccatctctctttatgtcatggtctttctgacttggctcgagta
cctagccccaaagttgtacttgcaagccaacctgacctggaatgtggattttcaagggat
ctctttattcagtggtgtcaggaccctaaaaactcaatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacggaaatagag
ttgaggaaacgtgtgaagcttgaagggaaagaacttgaggaatacttggaaaaagaaaaa
ctaaagaaagaagctgctaagaaacttgagcagtcaaaagaggcagatatagattccagt
gatgagagtgacattgaggaagatattgaccagccatcagctcataagacaaagcatgac
ctgatgatgaaaggtgaaggtagtcggaaaggaagtttcttcaaacaggcaaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagagattatc
aaaccagaggatttcttagtgccggaacttcaagctactgaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagatgaacccatggatcaagatttatctgatgtccctact
aagtgtatttctacaacagaatctattgaaataaaagctagggttacttacatagactat
gaaggacgctctgatggggattccattaaaaaaatcattaatcagatgaagccacgacag
ttgatcattgtccatggcccaccagaggccagtcaagatctggcagagtgctgccgtgcg
tttggtggaaaagatattaaagtgtacatgccaaagctacatgaaacagttgatgccact
agtgaaacacacatctaccaggtgagattaaaagactctcttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaattagcttggatagatggtgtcttagacatgagagtttcc
aaagtggacacaggcgttattttagaagaaggagagctgaaggatgatggagaagactca
gaaatgcaagtagatgccccttcagattctagcgttatagcgcaacaaaaggccatgaaa
agtctgtttggagatgatgagaaagaaacaggtgaagaaagtgaaatcattccaactttg
gaacccttgccaccccatgaggttcctggacatcagtcagtttttatgaacgaaccaaga
ttatcagacttcaagcaagttcttttacgggaggggattcaagctgaatttgtaggaggt
gtgcttgtttgcaacaatcaagtagcagtccgtagaactgaaactggacgcatcggattg
gaaggctgcctttgtcaagatttttatagaataagagaccttttatatgaacaatatgcc
attgtgtaa
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