Lemur catta (Ring-tailed lemur): 123645735
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Entry
123645735 CDS
T08326
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123645735 (RC3H2)
04121 Ubiquitin system [BR:
lcat04121
]
123645735 (RC3H2)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
123645735 (RC3H2)
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123645735 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
123645735
NCBI-ProteinID:
XP_045418117
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All DBs
Position
10:11666467..11710950
Genome browser
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEQEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKTVPSTNGISNAENSVSQLISRSTDSTLRALETVKKVGKVGTNGQNATGPSAD
SITENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPQKSSPFLTRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPD
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGESDYTEDSTDTKPDRDIELELSALDTDEPDGQSEQIEEILDI
QLGISSQNDQLLNGTAVENGHPVQQHQKEPLKQKKQSLGEDHVILEEQKTILPVTSCFSQ
PLPVSISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttagggtgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttaagtaatctaggtgagaataaacactatgaagttgcaaagaaa
tgcgttgaagatctggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactaagccgtccaatgcaaaggaaactggtgacacttgtaaactgt
caactggtagagcaagaaggtcgtgtaagagccatgcgagcagcccgttcacttggagaa
agaactgtaacagaactgatattgcagcaccagaaccctcagcaattgtctgccaatcta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtgttgctggcgctagaagatggttctgccctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcgtcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagggatgaagac
tcttccctgatgcagctaaaggaagaatttcggagttatgaggcattacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcaatgg
tcttcacttttatatggtgacttggctcataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggaacagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggtcat
gagacacctcagcctcagccaaacagcaagtacaaaactagcatgtgccgagatctgcga
cagcaaggagggtgtccacgaggaacaaattgtacatttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgccactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaactgttccaagtacaaacggaatttcaaatgcagaa
aatagtgtttcccagctaatctcacgtagtactgacagtaccttaagagctctggagact
gtgaagaaagtggggaaggttggcactaatggtcagaatgctactgggccctctgcagat
tctataactgaaaataaaattggttctccacccaagactcctgtaagtaatgtagcggct
acctcagctggaccctctaatgttggaacagagctgaattctgtgcctcaaaaatccagc
ccatttctaactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtatccacagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccagcctcctcctccgcagccgtat
ggaccagttcctccagtaccttctgggatgtatgctcctgtgtatgacagtaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtctatcagacatctttgcgggaaagatataactcattagat
ggatattattcagtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagat
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcacggatttctct
gagagtgtgagtggtacaaaatttgaagaagatcatctttctcattattctccctggtcc
tgtggcaccataggctcctgtataaatgccatcgattcagagcccaaagatgtaattgct
aattcaaatgctgtgttaatggacctggacagtggagatgttaagagaagagtacattta
tttgaaactcagagaaggacaaaagaagaagacccaataattccctttagtgatggaccc
atcatctcaaagtggggtgcaatttccagatcttcccgtacaggttaccatactacggat
cctgtccaggccactgcttcccaaggaagtgcgactaagcccatcagcgtatcagattat
gtcccttacgtcaatgctgttgattcaaggtggagttcatatggcagtgaggccacatca
tcagcacactatattgaacgggacagattcattgttactgatttatctggtcatagaaag
cattccagtactggagaccttttaagcattgaacttcagcaggccaagagtaactcatta
cttcttcagagggaggccaatgctctggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttaccttaaatcttctaagcaaggaaattgaactgagaaatggagagagt
gattatacagaagattcaacagatactaagcctgatagggatattgaattagagctttca
gcacttgatactgatgaacctgatggacaaagtgaacaaatcgaagagatcctggacata
caacttggaatcagttctcaaaatgatcagttgctgaatggaacagcagtggaaaatggg
catcctgtccaacagcaccaaaaggagccactaaagcagaaaaaacagagtttaggtgaa
gaccatgtgattctggaggaacaaaaaacaattctgccggtaacttcttgctttagccaa
ccactcccagtatctattagcaatgcaagttgcctccccatcaccacatctgtcagtgtt
ggcaacctcattttgaaaactcatgttatgtctgaagataaaaacgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
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