Lemur catta (Ring-tailed lemur): 123645824
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Entry
123645824 CDS
T08326
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat05017
Spinocerebellar ataxia
lcat05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
123645824 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123645824 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123645824 (VLDLR)
Membrane trafficking [BR:
lcat04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123645824 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
Mucin
hEGF
DUF4010
Motif
Other DBs
NCBI-GeneID:
123645824
NCBI-ProteinID:
XP_045418267
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All DBs
Position
10:complement(62354108..62383627)
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AA seq
873 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESGATGTGRKTKCESSQFQCTNGRCITLLWKCDGDEDCVD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISKSFVCNGQDDCN
DGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVVHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELIQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECHSTATTVTYSETKDTNTTEISPTSGLAPGGI
NVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagcggcgccaccggaaccggacgaaaaaccaaatgtgaatcctcccaattccagtgc
acaaacggccgctgtattactctgttgtggaaatgtgacggggacgaggactgtgttgat
ggcagtgatgaaaagaactgtgtaaagaagacatgtgcagagtctgactttgtgtgcaac
aatggccagtgtgtgcccaaccgatggcagtgtgatggggatcctgactgtgaagatggt
tccgatgaaagcccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgctccactcagtgtatcccagtgtcctggagatgcgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacataacatgtagccctgacgagttcact
tgctccagtggccgctgcatctccaagagctttgtatgcaacggccaggatgactgcaac
gatggcagcgatgagctcgactgtgccccgccaacctgcggcgcccacgagttccagtgc
agcacctcctcctgcatccccatcagctgggtgtgcgatgacgacgcagactgctctgac
cagtccgatgagtccctcgagcagtgtggccgccagccggtggtacacaccaagtgccct
gcaagcgagatccagtgcggctccggcgagtgcatccataagaagtggcgatgtgatggg
gaccccgactgcaaggacggcagcgatgaggtcaactgtccttctcgaacctgccgaccc
gaccaattcgaatgtgaggacggtagctgcatccatggcagcaggcagtgcaatggcatc
cgggactgtgtagatggttctgatgaagtcaactgcaaaaatgtgaatcagtgcttaggc
cctgggaaattcaagtgcagaagcggggaatgcatagatatcagcaaagtatgtaaccag
gagcaggactgcagggactggagcgacgagcccctgaaagaatgtcatgtaaacgaatgc
ttggtaaataatggtggatgttcccatatctgcaaagacctagttataggctacgagtgc
gactgtgcagctgggtttgagctgatagataggaaaacctgtggagatattgacgaatgc
caaaatccaggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
cccagtctaatcttcactaatagaagagacatcaggaagattggtttagagaggaaagaa
tatatccaactagttgaacagctaagaaacaccgtggctctcgatgctgacattgctgct
cagaaactcttctgggctgatttaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgacgcggcttctaagactatttcagtagct
accctggacggaaccaagaggaagttcctgtttaactctgacttgcgtgaacctgcctcc
atagctgtggacccgttgtctggctttgtttactggtcagactggggtgaaccagcaaaa
atagaaaaagcaggaatgaatggatttgatagacgtccgctggtgacagtagacatccag
tggcctaatgggattacgcttgaccttataaaaagccgtctctattggcttgattctaag
ttgcacatgttatccagcgtggacctgaatggccaagatcgaaggatagtactgaagtct
ctggagttcctagctcatcctcttgcactaacgatattcgaggatcgtgtctactggata
gatggggaaaatgaagcagtctatggcgccaataaattcactggatcggagctggccacc
ctggtcaacaaccttaatgatgctcaagacatcattgtctatcatgaacttatacagcca
tcaggtaaaaattggtgtgaagaagacatggagaatggaggatgtgaatacctctgcctg
ccggcaccacagattaacgatcactctccaaaatatacctgttcctgtcccaatgggtac
aatctcgaggaaaacggccgcgagtgccacagtactgcaactactgtgacttacagtgag
acaaaagataccaacacaacagaaatttcaccaactagtggactagctcctggagggatc
aatgtgaccacagcagtatcggaggtcagtgttcccccaaaagggacttctgcagcctgg
gccattcttcctctcttgctcttagtgatggcagcagtcggtggctacttgatgtggcgg
aattggcaacacaagaacatgaaaagcatgaactttgacaatcctgtgtacttgaagacc
actgaagaagacctctcgatagacattggtagacacagtgcttctgtcggacacacgtac
ccagcaatatcagttgtaagcacagatgatgatctagcttga
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