Lemur catta (Ring-tailed lemur): 123646178
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Entry
123646178 CDS
T08326
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04137
Mitophagy - animal
lcat04141
Protein processing in endoplasmic reticulum
lcat05014
Amyotrophic lateral sclerosis
lcat05022
Pathways of neurodegeneration - multiple diseases
lcat05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123646178
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123646178
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
123646178
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123646178
05022 Pathways of neurodegeneration - multiple diseases
123646178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123646178
03009 Ribosome biogenesis [BR:
lcat03009
]
123646178
04131 Membrane trafficking [BR:
lcat04131
]
123646178
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcat04147
]
123646178
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123646178
Ribosome biogenesis [BR:
lcat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123646178
Membrane trafficking [BR:
lcat04131
]
SNARE
SNARE associated proteins
Others
123646178
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123646178
Exosome [BR:
lcat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123646178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
123646178
NCBI-ProteinID:
XP_045418864
LinkDB
All DBs
Position
10:36837587..36853539
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggagctgattcaaaaggtgatgacctatcaacagccattctcaaacagaag
aaccgacccaatcggttaattgtcgatgaagccatcaatgaggacaacagtgtggtgtcc
ttgtcccagcccaagatggatgaattgcagttgttccgaggtgacacagtgttgctgaag
ggaaagaagaggcgagaagctgtgtgcattgtgctttctgatgacacatgttctgatgag
aagattcgaatgaatagagttgttcggaataaccttcgtgtacgcctaggggatgtcatc
agcatccagccatgccctgatgtgaagtacggcaaacgtatccatgtgctgcccattgat
gacacagtggaaggcataactggcaatctgtttgaggtataccttaagccatacttcctg
gaagcgtatcgacccatccggaaaggagacattttccttgtacggggtgggatgcgtgct
gtggagttcaaagtggtagagacagatcccagcccttactgcattgttgcgccagacacg
gtgatccactgtgaaggggagcctatcaaacgagaggatgaggaagaatccttgaatgaa
gtaggctatgatgacattggtggctgcaggaagcagctagctcagataaaggagatggtg
gagctacccctgagacatcctgccctctttaaggcaattggtgtgaagccacctcgggga
atcctgctttatggacctcctgggacagggaagaccctgattgctcgagctgtggcaaat
gagactggagcctttttcttcttgatcaatggtcctgagataatgagcaagttagctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggctgagaagaatgcacccgctatc
atcttcattgatgagttggatgccattgctcccaaaagagagaaaactcatggagaggtg
gagcggcgtattgtatcacagttgttgaccctcatggatggcctaaagcagagagctcat
gtgatcgtcatggcagcaaccaacagacccaatagcattgacccagccctacgacgattt
ggtcgctttgacagggaggtagatattggaatcccagatgcaacaggacgcttggaaatt
cttcagattcataccaagaacatgaagctggcagatgatgtggacctggaacaggtagcc
aatgagactcatgggcatgtgggtgctgacttagcagccctgtgctcagaggctgctctg
caagccatccgcaagaagatggatctcattgacctagaggatgagaccattgatgctgag
gtcatgaactctctggcagttactatggatgacttccggtgggccttgagccagagtaac
ccatcagcactgcgggaaacagtagtagaggtgcctcaggtgacctgggaagacattggg
ggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcaccca
gataaattcctcaagtttggcatgacaccttccaagggagttctattttatggacctcct
ggctgtgggaaaactttgttggccaaagccattgctaatgaatgtcaggccaacttcatc
tccatcaagggtcctgagctgctcaccatgtggtttggggagtctgaggccaacgtcaga
gaaatctttgacaaggcccgccaagctgccccctgtgtgctattctttgatgagctggat
tcgattgccaaggctcgtggtggtaacattggagatggtggtggggctgctgaccgagtc
atcaaccagatcctgacagaaatggatggtatgtccacaaaaaagaatgtgttcatcatt
ggcgctaccaaccggcctgacatcattgatcctgccatcctacgacctggccgtcttgat
cagctcatctacatcccacttcctgatgagaagtcccgtgttgccatcctgaaagccaac
ctgcgcaagtccccagttgccaaggatgtggatttggagttcctggctaagatgactaat
ggcttctctggagctgacctgacagagatttgccaacgcgcttgcaagctggccatccgt
gaatccatcgagagtgagattagacgagaacgagagaggcagacaaacccatcggccatg
gaggtagaagaggatgatccagtgcctgagattcgtcgagatcactttgaggaagccatg
cgctttgcccgtcgttctgtcagtgacaatgacattcggaagtacgagatgtttgcccag
acccttcagcagagtcggggctttggcagcttcagattcccttcagggaaccagggtgga
gctggccccagtcagggcagtggaggcggcacaggtggcagtgtatacacagaagacaat
gacgatgacctctatggctaa
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