KEGG   Lemur catta (Ring-tailed lemur): 123646222
Entry
123646222         CDS       T08326                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lcat  Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcat03041]
    123646222 (SMU1)
Spliceosome [BR:lcat03041]
 Complex B
  Other components
   Complex B specific factors
    123646222 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Vps41 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_IP5PC_F TFIIIC_delta Beta-prop_DCAF12 DUF7165 VPS8_N KNTC1_N PROPPIN Beta-prop_NOL10_N LisH zf_topless
Other DBs
NCBI-GeneID: 123646222
NCBI-ProteinID: XP_045418940
LinkDB
Position
10:38146691..38172269
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaatcgagtcctcggatgtgattcgtcttatcatgcagtacttgaaggag
aacagtttacatcgagcattagccaccttacaggaggagactactgtgtctctgaatacc
gtggacagtattgagagttttgtggctgacattaatagtggccattgggatactgtttta
caggctatacaatctctgaaattgccagacaaaaccctcattgacctctatgaacaggtt
gttctagaattgattgaactccgtgaattgggtgctgccaggtcacttctaagacaaact
gaccctatgatcatgttaaaacaaacacaaccagagcgttatattcatctggaaaacctc
ttggccaggtcttattttgatcctcgtgaggcatacccagatggaagtagcaaagagaag
agaagagcagcaattgctcaggccttagctggggaagtcagtgtggtgcctccatctcgt
ctcatggccttgctaggacaggcactgaagtggcagcagcaccaggggttgcttcctcct
ggtatgactatagatttgtttcgaggcaaagcagctgtcaaagatgtggaagaggaaaag
tttcctacacagctgagcagacatattaagtttggtcagaaatcacatgtggagtgtgct
cgattttctccagatggtcagtatctggtcactgggtctgttgatggattcattgaagtg
tggaactttactactggaaaaatcaggaaggatcttaagtaccaggcccaggataacttc
atgatgatggatgatgctgtcctctgcatgtgtttcagcagagatacagaaatgttagca
actggggcccaagatggaaaaatcaaggtatggaagattcagagtggacagtgtttaagg
cgatttgagagggcacacagcaaaggtgtcacctgtctaagcttttctaaggatagcagt
cagatccttagtgcttcttttgaccagacaattagaattcatggtttgaaatctgggaaa
accctgaaggaatttcgtggccattcctcctttgttaatgaagcaacatttacacaagat
ggacattatattattagtgcatcctctgatggcactgtaaagatctggaacatgaagacc
acagaatgctcaaacacctttaaatccctgggcagcaccgcaggaacagacattactgtc
aacagtgtgatcctgcttcctaaaaacccagagcactttgtagtgtgcaacagatcaaac
acagtggtcatcatgaacatgcagggccagattgtcagaagcttcagctctggtaaaaga
gaaggtggggactttgtgtgctgcgccctctctcctcgtggtgaatggatctactgtgtg
ggagaagactttgtgctctactgtttcagcacagtcactggcaagctggagagaactttg
acagttcacgagaaggatgtgattggtattgcacatcaccctcaccagaacctgattgct
acctacagtgaagatggactcctaaagctctggaaaccctaa

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