Lemur catta (Ring-tailed lemur): 123646450
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Entry
123646450 CDS
T08326
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03082
ATP-dependent chromatin remodeling
lcat04714
Thermogenesis
lcat05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123646450 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123646450 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123646450 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123646450 (SMARCA2)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123646450 (SMARCA2)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123646450 (SMARCA2)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
123646450 (SMARCA2)
Chromatin remodeling factors
BAF complex
123646450 (SMARCA2)
PBAF complex
123646450 (SMARCA2)
GBAF(ncBAF) complex
123646450 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
123646450
NCBI-ProteinID:
XP_045419382
LinkDB
All DBs
Position
10:complement(62735738..62898828)
Genome browser
AA seq
1579 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMSTM
GSADFPQEGMHQMHKPMDGMHDKGIVEDIHCGSMKGAGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLIPGDPQGMSQPNKGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQPQPQPQQ
QQPALVNYNRPSGPGPELSGPSTPQKLPVPAPSGRPSPAPPAAAQPPAAAVPGPSVPQPA
PGQPSPILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPD
LRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEK
LEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQ
KKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQ
AAKEKKKRRRKKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEA
PKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSE
KDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQG
LEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYE
FDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVD
EGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQ
WFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMS
ALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAE
HLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNF
LYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPH
QDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSH
ERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRK
PRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIED
GNLEEMEEEVRLKKRKRRRNVEKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAII
DTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKK
IKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEE
SEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFD
SDEEQDEHEQSEASGTDDE
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagaccctggtgcgatgccccacccagggccttcgccagggcccgga
ccttcccctggaccaattcttggacctagtccagggccaggcccatccccaggttccgtc
cacagtatgatggggcccagtcctggacctccaagtgtctcgcatcctatgtcgacaatg
gggtctgcagacttcccacaggagggcatgcaccaaatgcataagcccatggatggtatg
catgacaagggcattgtagaagatatccactgtggatccatgaagggcgccggtatgcga
ccacctcacccgggcatgggtcctccccagagtccgatggatcagcacagccagggctac
atgtcaccgcacccatctccgctgggagccccagagcacgtctccagccctatgtctgga
ggaggcccaaccccaccccagatgccaccgagccagccagggcccctcatccccggtgat
cctcaggggatgagccagcccaacaaaggtccctcgcctttcagtcccgtccagctgcat
cagcttcgagctcagattttagcttacaaaatgctggcccggggccaacccctgcccgaa
accctgcagcttgcagtccaggggaaaaggacattgcctggcatgcagcagcaacagcag
cagcagcagcagcagcagcagcaacagcagcagcagcagccacagccgcagccgcagcaa
cagcagccggcccttgtcaactacaacagaccatctggcccggggccggagctcagcggc
ccgagcaccccgcagaagctgccggtgcccgcgcccagcggccggccctcgcccgcgccc
cccgcagccgcgcagccgcccgcagccgccgtgcccgggccctcggtgccgcagccggcc
ccggggcagccctcgcccatcctgcagctgcagcagaagcagagccggatcagccccatc
cagaaaccgcaaggcctggacccggtggagattctgcaggagcgggaatacagacttcag
gctcgcatagctcataggatacaagaactggaaaatctgcctggctctttgccaccagat
ttacgaaccaaagcaactgtggagctgaaagcacttcggttactcaatttccagcgtcag
ctgagacaggaggtggtggcctgcatgcgcagggacacgaccctggagacggctctcaac
tccaaagcatacaaacggagcaagcgccagaccctcagagaggctcgcatgaccgagaag
ctggagaagcagcagaagatcgagcaggagaggaaacgccggcagaaacaccaggaatac
ctgaacagtattttgcaacatgcgaaagattttaaggaataccatcggtctgtggccggg
aagatccagaagctttccaaagcagtggcaacctggcacgccaacaccgagagggagcag
aagaaggagacagagcggattgaaaaggagaggatgcggagattgatggctgaagatgaa
gaggggtatagaaagctgattgatcaaaagaaagacaggcggttagcttaccttttgcag
cagaccgatgagtatgtggccaatctgaccaacctggtttgggagcacaagcaagcccaa
gccgccaaagagaagaagaagaggaggaggaagaagaagaaggctgaagagaatgcggaa
ggtggcgagtctgccctgggaccagatggagagccgatagatgagagcagtcagatgagc
gacctccctgtcaaagtgactcacacggaaaccggcaaggtcctatttggaccagaagca
cccaaagcgagccagctggacgcctggctggagatgaatcctggttacgaagttgctcct
agatccgacagtgaagagagtgattctgattatgaggaggaggatgaggaggaagagtcc
agcaggcaagagactgaagagaaaatacttctggatccaaacagcgaagaagtttctgag
aaggatgctaagcagatcatcgagacagcgaagcaagacgtggatgacgaatacagcatg
cagtacagcgccaggggctcccagtcctactacaccgtggctcacgccatctcagagagg
gtggagaagcagtccgccctcctcattaacgggaccctaaagcattaccagctccagggc
ctggaatggatggtttccctgtataataacaatttgaacggaatcttagctgatgaaatg
gggctaggaaagaccatacagaccattgcactcatcacttatctgatggagcacaaaaga
ctcaatggcccctatctcatcattgttcccctttcgactctatctaactggacatatgaa
tttgacaaatgggctccttctgtggtgaaaatttcttacaagggtactcctgccatgcgt
cgctctcttgtcccccagctacggagtggcaaattcaacgtccttttgactacttatgag
tacattataaaagacaagcacattcttgcaaagattcggtggaaatacatgatagtggac
gaaggccaccgaatgaagaatcaccactgcaagctgactcaggtcttgaacactcactat
gtggcccccaggaggatccttttgactgggaccccgctgcagaataagctccctgaactc
tgggccctcctcaacttcctcctccccacaattttcaagagctgcagcacattcgaacag
tggtttaatgctccatttgccatgactggtgaaagggtggacttaaatgaagaagaaact
atattgatcattaggcgtctacataaggtgttgaggccatttttactgagaagactgaag
aaagaagttgaatcccagcttccagaaaaagtggaatatgtgatcaagtgtgacatgtca
gctctgcagaagattctgtatcgccatatgcaagccaaggggatcctcctcacagatggt
tctgagaaagataagaagggaaaaggaggtgctaagacacttatgaacactatcatgcag
ttgagaaaaatctgcaatcacccatatatgtttcagcacatcgaggaatcttttgctgaa
cacctgggctattcaaatggagtcatcaatggggccgagctgtatcgggcctcaggaaag
tttgagctacttgatcgtattctgccaaaattgagagctactaatcaccgcgtgctgctt
ttctgccagatgacgtctctcatgaccatcatggaggattactttgcttttcggaacttc
ctttacctgcgccttgacggtaccaccaagtctgaagatcgtgccgctttgctgaagaaa
ttcaatgaacctgggtcccagtatttcattttcttgctgagcacaagggctggaggcctg
ggcttaaatcttcaggcggccgatacggtggtcatcttcgacagcgactggaatccccat
caggatctgcaggcccaagaccgagctcaccgcatcgggcagcagaacgaggtccgggtg
ctgaggctgtgcaccgtgaacagtgtagaggaaaagatcctcgcggcggcaaaatacaag
ctgaacgtggatcagaaagtgatccaggccgggatgtttgaccagaagtcttcaagccac
gagcggagggcgttcctgcaggccatattggagcacgaagaggaaaatgaggaagaagat
gaggtaccggacgatgagactctgaaccaaatgatcgctcgacgagaagaagaatttgat
ctttttatgcgcatggacatggaccggcggcgggaagatgcccggaacccgaagcgcaag
ccccgcttgatggaagaagatgagctgccgtcctggattattaaggatgatgccgaagta
gaaaggctgacgtgcgaagaagaggaggagaagatatttgggagggggtctcgccagcgc
cgtgacgtggactacagcgatgccctcaccgaaaagcagtggctaagggccattgaagac
ggcaatttggaagaaatggaagaggaagtacggctcaaaaagcgaaaaagacgaagaaat
gtggaaaaggaccctgcaaaagaagatgtggaaaaggctaagaagagaagaggccgccct
ccagctgagaagctgtcaccaaatccccccaaactgacaaagcagatgaacgccatcatc
gacactgtgatcaactacaaagataggtgtaacgtggagaaggtgcccagtaattctcag
ttggaaatagaaggaaacagttcagggcgacagctcagtgaagtcttcattcagttacct
tcaaggaaagaattaccagaatactatgaattaattaggaaaccagtggatttcaaaaaa
ataaaggaaagaattcgtaatcataagtaccggagcctaggcgacctggagaaagatgtc
atgcttctctgtcacaacgctcagacgttcaacttggagggatcccagatctacgaagac
tccattgtcttacagtcagtgtttaagagtgctcggcagaaaattgccaaagaggaagag
agtgaggatgaaagcaatgaagaagaggaagaggaagatgaagaggagtcagagtctgaa
gcgaaatctgttaaggtgaaaatcaagctcaataaaaaagatgagaaaggccgggacaaa
ggaaaaggcaagaaaaggccaaatcgaggaaaagccaaacctgtagtgagcgattttgac
agcgacgaggagcaggatgaacatgaacaatcagaagcaagtgggactgatgatgagtga
DBGET
integrated database retrieval system
