Lemur catta (Ring-tailed lemur): 123646511
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Entry
123646511 CDS
T08326
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123646511 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcat03041
]
123646511 (PRPF4)
Spliceosome [BR:
lcat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123646511 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
123646511
NCBI-ProteinID:
XP_045419531
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Position
10:complement(21254262..21268812)
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AA seq
522 aa
AA seq
DB search
MASSRASSTQAAKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGI
EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT
LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLW
IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS
PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA
ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH
QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY
HIATGSGDNTCKVWDLRQRRCIYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP
GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcacgggcctcctccacgcaggcagccaaaactaaagcacctgatgactta
gtcgctcctgttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagg
gagcgtctggccaaaggagagtctgggattttaggaaaagaaggacttaaagcaggaatc
gaagcaggaaatattaatataacctctggagaagtgtttgaaattgaggaacacatcagt
gagcgacaggcagaagtattggctgagtttgaaagaaggaagcgagcccggcaaatcaat
gtttccacagatgactcagaggtcaaggcttgccttagggccttgggggaacccatcaca
ctttttggagagggccctgctgaaagaagagaaaggttaagaaatatcctctcagtagtt
ggtactgatgccttaaaaaagaccaagaaggatgatgagaaatctaagaagtccaaagaa
gagtatcagcaaacctggtaccatgaaggaccaaacagcttgaaggtggctagactgtgg
attgctaattattcactgcccagggcaatgaaacgcttggaagaggctcgtcttcataaa
gagattcctgagacaactagaacctcccagatgcaggagctgcacaaatctctgcggtct
ttgaataatttctgcagtcagattggggatgatcggcctatctcctactgtcactttagt
cccaattccaagatgctggccacagcttgttggagtgggctttgcaagctctggtctgtt
cctgattgcaacctccttcacactcttcgaggccataacacaaatgtaggagctattgta
ttccatcccaaatccactgtctccttggaccaaaaagatgtcaacctggcttcttgtgct
gctgatggctctgtgaagctttggagtcttgacagcgatgaaccagtggcagatattgaa
ggccatacagtgcgtgtggcccgggtaatgtggcatccatcagggcgtttcctgggcacc
acctgctatgaccgttcatggcgcttatgggatttggaggctcaggaggagatcctgcat
caggagggccacagcatgggcgtgtatgacattgccttccatcaagatggctctttggct
ggcaccgggggactggatgcatttggtcgagtttgggacctacgcacaggacgttgtatc
atgttcctagaaggtcacctgaaggaaatctatggaataaatttctcccccaatggctac
cacattgcaactggcagtggtgacaacacctgcaaagtgtgggaccttcgacagcggcgt
tgcatctataccatccctgcccatcagaacttagtgaccggtgtcaagtttgagcccatc
catgggaatttcttgctcactggtgcctatgataatacagccaagatctggacccaccca
ggctggtccccactgaagaccctggctggccacgaaggcaaagtgatgggtttagacatt
tcttccgatgggcagctcatagccacttgctcatatgacaggaccttcaagctctggatg
gctgaatag
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integrated database retrieval system
