Lemur catta (Ring-tailed lemur): 123646539
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Entry
123646539 CDS
T08326
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcat03036
]
123646539 (SHOC1)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123646539 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
MYO6_lever
DUF4943
Motif
Other DBs
NCBI-GeneID:
123646539
NCBI-ProteinID:
XP_045419584
LinkDB
All DBs
Position
10:22335176..22415407
Genome browser
AA seq
1513 aa
AA seq
DB search
MFSALKYCAIDYLYENVVRKKFCRNALSLQIPSCLYQDENCHAGVTDYKFRRPWTRVSAV
SIRGMTDTSVLDQWKASLIVEDFLEKRSITGMVTQINCEFEEVVPSSNPNSQTEVEEASL
YTHKDYSEVFTPVSCSEKCPALQAQNQDLSIDDEEIIFINSLMTYKNQLPTSHTLWDRLK
LFLVKDPLLDSKGQIFTEANFSRECFSFQENLKVSVKEDFCMDKENFCQEKLEDTVGLNQ
PSSFPLKYECLIPTSVEQEIAIPSSSELKESLNLMPEIINYVDENEQLLKKDLTTKHAVD
TEDMKCSSTESLTIQSQSEPEYSEPGELEMPLTHLPLTSQHSSVNSLCTGLQTFPSFPVG
KISLLIAEESAKKYCMVWQLESCRSSLNSFLLTVRRIQESNSQYSVTDLKKIFSIEEGSL
GINPIKADWWKQAGLNLMMRQTLKHLNTYLHHDHLSSNDTEMERFLPTEMLPLQSCTEHK
SCSSPIILTNEKSTNDCLSLPQKSPSLTEEEPDLCFSDEYISVQRPTKEEKPKNNQELVN
GIVQKKENKDNVELDCTVRSTTSSSSSRIKKASFEHGKKRENDLDLLSDFMMLRNKYKTC
TSETEITESAKKDDKEECSLTLQEKSPIVCTNKTLEKTNQERRTNNVIEIQASDSQCQAY
SLLEAAATPILQKLICLCTLPAANWKFAIVIFDQTRFLLKEQEKVVSDAIPQGTNDGREV
TFKHAALLHLLVTIRDVLLTCSLDTALGYLSHAKNIYRSILGSYLDDIWRQLEIVQFVRE
NKPETNYKIQELQCQILSWMQSQQQIKVLVIIRMDSDDEKHLLIKILSKMEGLTLTVLHS
NERKDFLESESVLKGTSSCVVVHNRYIGADFPWSNFSFVVEYNYVENSCWTKHCEKLNIP
YIAFKVILPDTVLKRSNLLDRFGGFLLEIHIPYVFFASEGLLHTPEILQLLESNYNITVV
ERCCSESLKLFGSTEYYVVVTIDEQTAIILQDLEELNREKASDNIIMRLMALSFQYSYCW
IILYTKQTLNSEYQLTEKRLHHLALIYAALVSSGLNSEELDVKLIISPGVEETALIIRQI
ADHNLMTSKRDPRECLDKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLHWILLAT
LCQLQELLPEVPEKVLKHFYSITSLFKISSYSTTKSPEISSPWENRNQTDTFTSQSSASG
SSDSIIQEHNEFYQYSELGETVQEDINNTSNYNSSLMELKKVPCILPSVTSYNPTSYWKD
SSCNPNIVENNNPFLVNTESRKAACNSFVNQNDSESDIFSLGLRQMNCETIISPTDTPKT
VVPNFINYQKKGTHEAKGFINKDISAPIFSLEGSQSPLHWNFKKNVWEQEDHSFNFQFGT
EQTTRDKWYSQKDNLFTNQQQCLLDELEDFTCESSNVETKRTFWRGLPSVPSLDLFCPSE
TNVNQREFNRHYLYERTGKCLGRKRHPESSSDPRDKEPLTGFMYSPPPQFKKRRLVYEKV
PGRADGQTRLKFF
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagcattgaaatattgtgcaatagactatttatatgagaatgtagttagaaag
aagttttgcagaaatgctttatcacttcaaatcccttcatgtttatatcaagatgaaaac
tgtcatgcaggagttactgactataaatttaggaggccatggacaagagtctcagctgtt
tcgattcggggaatgacagacacctcagtcttggatcaatggaaagcaagtctcattgtg
gaggatttccttgagaaaagatcgattacaggaatggtgacccaaattaattgtgaattt
gaggaagttgttccaagttcaaatccaaactcccaaactgaagtagaggaagccagttta
tacacccacaaggactacagtgaagtctttacacctgtcagctgttcagaaaaatgtcca
gcacttcaagcacaaaaccaagatttatctattgatgatgaagaaataattttcataaat
agtttgatgacttataaaaatcagctaccaacttcacatactctctgggatagactaaaa
ctatttttggtaaaggatccccttttagattccaagggacagatcttcacagaagctaat
ttttccagggaatgtttctccttccaagaaaatttgaaagtttctgtgaaagaagacttt
tgtatggataaagagaacttttgtcaggagaaactagaagatacagtaggtttaaaccag
ccatcaagttttcctcttaagtatgaatgcttaatacctacaagcgtcgaacaagaaatt
gctattccatcatcctcagaactgaaggagtcattaaacttaatgccagaaataataaat
tatgtagatgaaaatgaacagcttttaaaaaaagatcttactaccaagcatgcagttgac
actgaggatatgaaatgcagctccacagagagtttgaccatccaaagccagagtgaaccg
gagtacagtgaaccaggagagttagaaatgccactaactcatctacccctaacaagccaa
cattcttcagtgaattcattatgtacaggacttcagacatttccatcttttcctgttggt
aaaattagtttgcttattgctgaagaatcagcaaagaaatattgtatggtgtggcaatta
gaaagctgcagaagctctttgaactcatttttgcttacagtgcgaagaattcaagagtcc
aacagtcaatattcagttacagatttgaagaagatattttctattgaagaaggaagcctt
gggattaatcccataaaggcagactggtggaaacaggcaggactaaatctaatgatgaga
caaactttgaaacatctgaatacatacttgcatcatgatcatctgtcttctaatgacact
gaaatggagagatttttgcctacagaaatgcttccattacaatcatgtacagaacataaa
agttgttcctcacctattatacttactaatgagaaatctacaaatgattgcttatcactt
ccacaaaaaagcccatcgctgacggaagaagaaccagatttgtgtttttctgatgaatat
atctctgttcaaagaccaacaaaagaagaaaaaccaaagaataatcaagagctagttaat
ggaatagtccaaaagaaagaaaataaagataatgttgaacttgactgcacagtgcgatct
actacatcatcttcctcttcaagaattaaaaaagcatcttttgaacatggtaaaaaacgg
gagaatgatttggatcttttgagtgacttcatgatgctgagaaataaatataagacttgc
acctcagagactgaaatcacagagagcgctaaaaaagatgataaagaagaatgttctttg
actcttcaagaaaaaagtcctattgtctgtactaataaaaccctggagaaaacaaatcag
gaaaggagaacaaataatgtcattgaaattcaagcatcagatagccagtgccaagcatac
tctctcctagaagcagcagctactcctatcttacaaaaacttatatgtctctgtactctt
cctgctgctaattggaaatttgccattgttatttttgaccaaacaaggtttctcttaaaa
gaacaagaaaaagtagtaagtgatgctattccccaaggtacaaatgatggaagagaagtg
acattcaagcatgctgccctcctacaccttctggtaacaattagagatgtccttttaaca
tgcagcttggacacagcattgggatatttgtcacatgcaaaaaacatctacagaagcatt
ttaggctcctatttggatgatatttggaggcagctggagattgttcagtttgttagggaa
aacaagcctgaaaccaactacaagatacaggaattgcaatgtcagatactaagttggatg
caaagtcaacagcaaattaaggtgctggttataataagaatggactcagatgatgaaaaa
catttactcattaaaattcttagtaaaatggaaggcttaacattgacagtccttcattca
aatgaaagaaaagattttctggaatctgaaagtgttttaaaaggtacaagttcctgtgta
gttgtacataatcgatacattggagcagatttcccctggagtaacttctcatttgtggta
gaatacaattatgtggaaaattcttgttggactaaacattgtgaaaagttgaatattcct
tacatcgcctttaaagtaattcttccagacacagttttaaaaagaagcaacttgctggat
agatttggtggttttcttttggaaattcatattccatatgtgttttttgcatctgaagga
cttcttcatactccagaaatacttcagctgttagaatctaactataatatcacagtagtg
gagagatgctgcagtgagtcattgaaactctttggaagtacagagtattatgtagtggtg
acaattgatgaacaaactgccataattttgcaggacctagaagaattgaatcgtgagaag
gcatcagacaatattattatgagactaatggcattatcattccaatacagctattgttgg
ataattttatataccaaacaaacattaaattcagagtaccaacttacagaaaagagactt
catcacctagcactgatttatgcagctttggtttcatctgggctaaactctgaagaactg
gatgtaaagcttataatttccccaggagtagaagagacagcactgataattcgacaaatt
gctgaccacaatttaatgacctcgaagagagatcctcgtgaatgtttggataaatcctgg
cttgaagtttcaccatctaaggaagaaatgtacttacttgattttccatgtattaaccca
ttggtggctcaactcatgttaaataaaggaccttcactgcattggatattattagcaact
ctgtgtcaacttcaggaactcctacctgaagttccagagaaagtgttaaagcatttttat
agcatcacttccttattcaagattagttcttattccacaacaaaatcacctgaaatttca
tcaccttgggaaaataggaatcagactgatacctttacttctcagagttcagcttctggc
tcttccgactctatcattcaagaacataatgaattttaccaatattcagaattaggagag
acagtacaggaagacataaacaacacttcaaattataactcttcccttatggaactaaaa
aaagtgccatgcattttaccatctgtgacttcatacaatccgactagctactggaaagac
tccagttgtaaccctaatatagtggagaataataatccttttctagttaatacagaatca
aggaaagcagcttgtaactcctttgtaaaccagaatgattcagagtcagatatcttttct
ttgggcctaagacaaatgaactgtgaaactataatatcaccaactgacactccaaagaca
gttgtccctaattttataaattatcagaaaaaaggaacacatgaagcaaaaggattcata
aataaagacatatctgcccctatcttttcactagaaggctctcaatctcctcttcattgg
aactttaaaaaaaatgtatgggaacaagaggatcactcattcaactttcagtttggtaca
gagcagactacacgtgacaagtggtactctcagaaagataatttattcactaatcaacaa
caatgtctgttggatgaattagaagactttacatgtgaaagttcaaatgttgaaactaaa
aggactttctggagaggattaccatctgtccccagtttggatttattttgtccttctgag
actaatgtaaatcaaagagaattcaacagacactatctctacgaaagaactggaaagtgt
ttaggacggaaaaggcaccctgaatcttcatctgatccaagagacaaggaaccattaaca
ggtttcatgtactcaccaccaccacaattcaaaaaacgacgtctagtgtatgaaaaagtc
cctggtagggctgatggacagactcggctaaagtttttttga
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integrated database retrieval system
