Lemur catta (Ring-tailed lemur): 123646642
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Entry
123646642 CDS
T08326
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat02010
ABC transporters
lcat04148
Efferocytosis
lcat04975
Fat digestion and absorption
lcat04979
Cholesterol metabolism
lcat05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123646642 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123646642 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
123646642 (ABCA1)
04979 Cholesterol metabolism
123646642 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123646642 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcat02000
]
123646642 (ABCA1)
Transporters [BR:
lcat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
123646642 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
123646642
NCBI-ProteinID:
XP_045419793
LinkDB
All DBs
Position
10:27520150..27649016
Genome browser
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIVCNANNPCFRYPTPGEAPGVIGNFNKSIVSRLFSDARRLLLYSQKDT
SMKDIHKVLRTLQQIENSTSSLKLQDFLVDNETFSGFLYHNLSLPRPTVDKMLRAAVSLR
KVVLQGYQLHLTNLCSGSKLEEVIQLGDQEVAELCGLPREKLDAAERMLRSNMDILKPVV
IGLNSTSPFLSRELSEATKTLLDSLGALAQELFSMRSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDADTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLLGKILYTPDTPVTRQVMAEVNKTFQELSVFHDLEGMWQELS
PKIWTFMEKSQEMDLVRMLLESRGNDHFWEQQLDGLDWTAQDIVAFLAKYPEDVQSANGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIATEVRLINKSMELLDERKFWAGIVFTG
ITPGSIELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIVKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFI
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIFAS
LLSPVAFGFGSEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDSFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESEEKSHPGSSQKGVSEICMEEEPTHLKLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKASQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDRQSCLRPFTEDDAIDPNDSDIDPESRETDFLSGMDSKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELH
PWMYNEQYTFVSNDAPEDRGTQELLSALTRDPGFGTRCMEGNPIPDKPCLAGEEEWTTAP
VPQTITDLFQNGNWTMQNPSPACQCSSDKIKKMLPVCPAGAGGLPPPQRKQNTADTLQNL
TGRNISDYLVKTYVQIIAKSLKNKMWVNEFRYGGFSLGVSNSQALPPSQEVNDAIKQVKK
HLRVAKDSSADRFLSNLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSRYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggccccagctgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgctgctggaagtggcctggcctctatttatcttcctgatcctgatc
tctgttcggctgagctacccaccctacgaacaacatgaatgccactttccaaataaagcc
atgccctctgcaggaacacttccctgggttcaggggatcgtctgcaatgctaacaacccc
tgtttccgttacccaactcctggtgaggcccctggggtcattggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgcccggaggcttcttttatatagccagaaggacacc
agcatgaaggacatacacaaagttctgagaacgttacagcagattgagaattccacctca
agcttgaagcttcaggatttcctggtggacaatgaaaccttctctgggttcctgtatcac
aacctctctctcccaaggcctactgtggacaagatgctgagggctgctgtcagtctccgc
aaggtagttttgcaaggctaccagttacatttgaccaatctgtgcagtggatcaaaatta
gaagaagtgattcagcttggtgaccaagaagttgccgagctttgtggtctaccaagggag
aaactggatgcagcagagcgcatgcttcgctccaacatggacatcctgaagccagttgtg
ataggactaaactctacatctcccttcctgagcagggagctgagtgaagccacaaagact
ctgctggacagtctcggggctctggcgcaggagctgttcagcatgcggagctggagtgac
atgcggcaggaggtgatgtttctgaccaacgtgaacagctccagttcctccacccagata
taccaggccgtgtctcgcatcgtctgtggccatcctgagggcggggggctgaagatcaag
tccctcaactggtatgaggacaacaactacaaggccctctttggaggcaatggcaccgag
gatgatgctgacaccttctatgacaactctactactccttactgcaatgatttgatgaag
aacttggagtctagtcctctttcccgcattatctggaaagctctcaagcctctacttctc
gggaagatcctgtatacacccgacactccagtcacaagacaggttatggctgaggtgaat
aagaccttccaggaactatctgtcttccatgatctggaaggcatgtggcaagaactcagc
cccaagatctggaccttcatggagaagagccaagaaatggatcttgtccggatgctgttg
gagagcagaggcaatgaccacttttgggaacagcagttggatggcttagattggacagcc
caagacattgtggcatttttggccaagtacccagaggatgtacagtctgctaatggctct
gtgtacacctggagagaagctttcaatgagaccaaccaggccatccagaccatatctcgt
tttatggagtgtgtcaacctgaacaagctggaacccatagccacagaagttcggctcatc
aacaagtccatggagctcctggatgagaggaagttctgggctgggatcgtgttcactgga
attaccccaggcagcattgagctgccgcatcatgtgaagtacaagatccgaatggacatt
gacaacgtggagaggacgaataaaatcaaggacgggtactgggaccctggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggcttcgcctacttgcaggacgtggtg
gagcaggcaatcatcagggtgctgacgggcaccgagaagaaaaccggcgtctatgtgcag
cagatgccctacccctgctacgtcgatgacatcttcctgcgggtgatgagccggtcaatg
cccctgttcatgacgctggcctggatttactctgtggcggtgatcgtcaagggcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacggcatc
ctctggtttagctggttcatcagtagcctcatccctctgcttgtgagcgctggcctgctg
gtggtcatcctgaagttaggaaacctgctgccctacagcgaccccagcgtggtgtttatc
ttcctgtctgtgttcgccgtggtgaccatcctgcagtgcttcctgatcagcaccctcttc
tccagagccaacctggcggcagcctgtggcggcatcatctacttcacgctgtacctgccc
tatgtcctgtgcgtggcgtggcaggactatgtgggcttcacactcaagatctttgccagc
ctgctgtctcctgtggcttttgggtttggcagtgagtactttgcccttttcgaggagcag
ggcattggggtgcagtgggacaacctgtttgagagccctgtggaggaagatggcttcaat
ctcaccacttcggtctccatgatgctgtttgacagcttcctctatggggtgatgacatgg
tacatcgaggccgtctttccaggccagtatggaattcccaggccctggtactttccctgc
accaagtcttactggtttggtgaggaaagtgaggagaagagccaccctggctccagccag
aagggagtatcagaaatctgcatggaggaggaacccacccacctgaagctgggcgtgtcc
attcagaacctggtaaaagtttaccgggatggcatgaaggtggctgtcgatggcctggca
ctgaatttttatgagggccagatcacctccttcctgggccacaacggagcggggaagacg
accactatgtcaattctgactgggttgttccctcctacctcgggcactgcctacatcctg
gggaaagacattcgctctgagatgagtaccatccgacagaacctgggggtctgtccccag
cataatgtgctgttcgacatgctgactgttgaagagcacatctggttctatgcccgccta
aagggactctcagagaagcacgtgaaggcagagatggagcagatggctctggatgttggt
ttgccacccagcaagctgaaaagcaaagcaagccagctgtcaggtggaatgcagcgaaag
ctatctgtggccttggccttcgtgggcggatccaaggttgtcattctggatgagcccacg
gctggcgtggacccttactcccgcaggggaatctgggagctgctgctgaaataccgacaa
ggccgcaccatcatcctctccacacaccacatggatgaagcagacatcctgggggacagg
attgccatcatatcccatgggaagctgtgctgtgtgggctcctcgctgtttctgaagaac
cagctgggaacaggctactacctgaccctggtcaagaaagatgtggaatcctccctcagt
tcctgcagaaacagcagcagcacagtgtcgtacctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tccgccatatccaacctcatcaggaagcacgtgtctgaagcccggctggtggaagacatt
gggcatgaactgacctacgtgctgccgtatgaagctgctaaagagggggcctttgtggaa
ctcttccatgagattgatgaccggctctcagacctgggaatctctagttatggcatttca
gagaccaccctggaagaaatattcctcaaagtggctgaagagagtggggtggatgctgag
acctcagatggtaccttgccagcaagacgaaacagacgggccttcggagacaggcaaagc
tgtcttcgcccattcactgaagacgatgccattgatccaaacgattctgacatagaccca
gaatctagagagacagactttctcagtgggatggacagcaaaggctcctaccaggtgaag
ggctggaaactgacacagcaacaatttgtggcccttttgtggaagagactgctgattgcc
agacggagtcggaaaggattttttgctcagattgtcctgccagctgtgtttgtctgcatt
gccctggtgttcagcctgattgtgccaccctttggcaagtaccccagcctggaacttcac
ccctggatgtacaatgaacagtacacatttgtcagtaatgatgctcctgaggacagggga
acccaggaactcttgagcgccctcaccagagaccctggcttcgggacccgctgtatggaa
ggaaacccaatcccagacaagccctgcttggcaggggaggaggagtggaccactgcccca
gttccccaaaccatcacggacctcttccaaaatgggaactggacgatgcagaacccctcg
cccgcctgccagtgtagcagtgacaagatcaagaagatgctgcccgtgtgtcccgcaggg
gcaggggggctgcctcctccgcaaagaaaacagaacactgcagacacccttcagaacctg
actggaagaaacatttcggattacctggtgaagacatatgtgcagatcatagcgaaaagc
ttaaagaacaagatgtgggtgaatgagtttaggtatggcgggttttccctgggtgtcagt
aattctcaagcacttcctccgagtcaagaagttaatgatgccatcaagcaagtgaagaaa
cacttgagagtggccaaggacagttctgcagatcgatttctcagcaacttgggaaggttt
atgacaggactggacaccaaaaataatgtcaaggtgtggttcaataacaagggctggcat
gccatcagctctttcctgaatgtcatcaacaatgccattctccgggccaacctgcagaag
ggagagaatcctagccgatatgggattactgctttcaatcaccccctcaatctcaccaag
cagcagctctcagaggtggctctgatgaccacatcagtggacgtccttgtgtccatctgc
gtcatctttgcaatgtccttcgtcccagccagctttgtcgtgttcctgatccaggagcgg
gtcagcaaagcgaagcacctgcagttcatcagtggagtgaagcctgtcatctattggctc
tccaattttgtctgggacatgtgcaattatgtggtccccgccacgctggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgctagccctg
ctacttttactgtacgggtggtcgatcacaccgcttatgtacccagcctccttcgtgttc
aagatccccagcacagcctatgtggtgctcaccagtgtgaaccttttcatcggcatcaat
ggcagcgtggccacctttgtgctggagctcttcaccaacaataagctgaacaacatcaat
gatatcctgaaatcggtattcttgattttcccacatttttgcctgggacgagggctcatt
gacatggtgaaaaaccaggcaatggctgatgccctggaaaggtttggggagaatcgcttt
gtgtcgccactatcttgggacttggtgggacgaaacctcttcgccatggctgtggaaggg
gtggtcttcttcctcattactgttctgatccagtacagattcttcatcaggcccagaccg
gtaaatgcaaagcttcctcctctgaatgatgaggatgaagatgtgaggcgggaaagacag
agaattcttgatggtggaggccagaatgacatcttggaaatcaaggagttgacgaagata
tatagaaggaagaggaagcctgctgttgacaggatttgcgtcggcattcctcctggtgag
tgctttggactcctgggagttaatggggctgggaaatcatcaaccttcaagatgttaact
ggagataccaccgttaccagaggagatgctttccttaacaaaaatagtatcttatcaaac
atccatgaagtccatcagaacatgggctattgccctcagtttgatgccatcacagagctg
ctgactgggagagagcacgtggagttctttgcccttttgagaggagtcccagagaaagaa
gttggcaaggtgggtgagtgggcaattcgcaaactgggcctcgtgaagtatggagaaaaa
tacgccggaaactacagtggaggcaataagcgcaagctgtcgacagccatggctctgatt
ggcgggccccctgtggtgtttctggatgaacctaccacaggcatggatcccaaagcccgg
cgattcttgtggaattgtgctctaagtattgtcaaggaggggagatcagtggtgcttaca
tctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatgga
aggttcaggtgtcttggcagcgtccaacatctgaaaaataggtttggagatggttataca
atagttgtacgaatagcagggtccaaccctgacctgaagcctgtccaggagttctttgga
cttgcctttccaggaagtgtgctcaaagagaaacaccggaacatgctgcagtaccagctt
ccctcttcattatcttctctggccaggatattcagcatcctctcccagagcaaaaagcga
ctccacatagaagactactctgtttctcagacaacacttgaccaagtatttgtgaacttt
gccaaggaccaaagtgatgacgaccacttaaaggacctgtcattacacaaaaaccagaca
gtagtggatgttgcagttctcacatcttttctgcaggatgagaaagtgaaagaaagttat
gtatga
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integrated database retrieval system
