Lemur catta (Ring-tailed lemur): 123647119
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Entry
123647119 CDS
T08326
Symbol
GSDME
Name
(RefSeq) gasdermin-E isoform X1
KO
K22146
gasdermin-E
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
123647119 (GSDME)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcat02000
]
123647119 (GSDME)
Transporters [BR:
lcat02000
]
Other transporters
Pores ion channels [TC:
1
]
123647119 (GSDME)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
123647119
NCBI-ProteinID:
XP_045420306
LinkDB
All DBs
Position
11:complement(71280920..71352748)
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AA seq
492 aa
AA seq
DB search
MFAKATRNFLREVDDGSDLIAVSNLNDSDKLQPLSLVTKKKRFWFWQRPKYQFLSATLGD
VLTEDQFLSPVVVESDFVKYEGKFGNQVSGTIETALGKMKLNVAGRSRVQSQSSFGTLRK
QEVDLQQLIRDSVERTINLKNPILQQVLERRNEVLCILTQKIATTQKCVISEQVQVEETC
GGMVGIHTKTVQVSATEDGNLVKDSNVVLEIPATTTIAYRVIELYVKLDGQFEFCLLRGK
HGGFERERRVGSVYLDPPVFREFAAVDVPDAGHGTSSQDGPLSALKQATLLLERNFRPFV
ELPESQQTAVSSVLQAVLFDEELLVVLEQVCEDMVNGLPPPLAVLAELKPPQQQDLVTFL
RLVGCSVQGLEDPVNNQRLFATAYFLVSALAEMPDNAAVLLGTCCKLQIVPALCHLLQAL
SDDGVSDLEDPTLAPLKDTERFGIVQRLFALADISLERLQSSVKAVIPKDPNVFPLILYI
TLKGLCALGRGH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaagcaacaaggaatttccttagagaagttgatgatggcagtgacctgatt
gcagtatcaaatttgaatgactctgataagttacagcctctaagtctggtgaccaaaaag
aagagattctggttctggcaacgacccaagtaccagtttttatccgccacccttggagat
gtactcacagaagaccagtttctgagtccagtggtcgtggagtcggactttgtgaaatac
gagggcaagtttggaaaccaggtgagcgggaccatcgagacggcgctggggaagatgaag
ctgaacgtcgccggcaggagccgcgtgcagagccagtcttcgtttgggaccctgaggaag
caggaggtggacttgcagcagctcatcagggactcggtggagagaacaatcaatctgaaa
aaccccattctgcagcaggtgctggagaggaggaacgaggtcctgtgcatcctgacacag
aagatcgcaacgacgcagaagtgtgtgatctctgagcaggtgcaggttgaggagacgtgt
ggtgggatggtgggcatccacaccaagaccgtgcaggtgtcagcgacggaagatggcaac
ctcgtcaaggacagcaacgtggtgctggagatcccagccaccaccaccatcgcctaccgc
gtcatcgagttatatgtgaaactggatggccagttcgaattctgcctcctccgagggaaa
cacggtggctttgagcgcgagaggagagttgggtctgtctacctggatcccccggtcttt
cgagagtttgcagccgtggacgtgccagatgctgggcatgggacgtcttcccaggatggg
ccgttaagtgctttaaaacaagccaccctgctcttggagaggaatttccgtccctttgtg
gagctgccagagtcacaacagacagctgtgagcagcgtcctccaggcggtcctgtttgat
gaggaattactcgtggtcctggaacaagtgtgtgaggacatggtcaatggtctcccaccc
ccactggcggtgctggcggagctgaagcccccgcagcagcaggacctcgtgaccttcctg
cgcctggtggggtgcagtgtgcaggggctcgaggacccagtcaacaatcagaggctcttt
gcaacggcctacttcctggtcagtgctctagcagaaatgccagataacgcagcagttctg
ctgggtacttgctgcaaactccagattgttcctgcgctgtgccacttgcttcaggctctg
tctgatgatggagtatctgatcttgaagatccaaccttggctccgctgaaagatacagaa
aggtttgggattgtgcagcgcttgtttgccctagcggacattagcctggagagactgcag
tcatctgtgaaagccgtcatcccgaaggaccctaatgttttcccactaattctttacata
accctgaaggggctctgtgctctaggcagaggacattag
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