Lemur catta (Ring-tailed lemur): 123647600
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Entry
123647600 CDS
T08326
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123647600 (VPS50)
Membrane trafficking [BR:
lcat04131
]
Protein recycling
Others
EARP complex
123647600 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
123647600
NCBI-ProteinID:
XP_045421139
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All DBs
Position
11:53538226..53650492
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AA seq
964 aa
AA seq
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MQKIKSLMTRQGLKSPQESLGDLGAIESLRVPGKEEFRELREQPCDPQAEQELINSIEQV
YFSADSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTASASEG
SSMMATEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgacccgccagggtctgaaaagccctcaggagagcctt
ggtgatctcggtgccattgagagtctccgggtccctggaaaggaggaattcagggaactt
cgagaacagccatgtgaccctcaagctgaacaagagcttattaatagtattgaacaagta
tatttttctgccgactcatttgatattgttaaatatgagctggagaagcttccacctgtt
ctcaatttgcaagaattagaggaatacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaagcagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggtcttcaattagctgctgttatctgcacaaatgggaga
agacacttgaatattgcaaaagaaggttttactcaagctagtttaggccttcttgcaaat
cagaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtacggttaagtgaaatgctagaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagccgccagcacttttaaacattacagttgtataagt
gaactgaattcaaagctgcaagatactttagaacaaattgaggaacagctggatgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaagttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcacatgcacttcacccaagcc
atccacaatactgtgtttcaagttgttcttggttacgtggaactatgtgctggaaacaca
gacacaaaattccaaaagctgcaatataaagatctctgtacacacgttacaccagacagc
tatattccatgccttgcagacctgtgcaaagcactgtgggaggttatgctcagttactac
aggactatggaatggcacgaaaagcatgacaatgaggatactgcttcagcttctgaagga
agtagtatgatggctactgaagaaactaattttgatcgtggctatgtaaaaaagaagtta
gagcatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctatttgctt
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataataagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagagtcc
attagaaaacaaagtgtcaattattttaagaactaccacagaacacggcttgatgaactg
agaatgttcttagagaatgagacttgggaactttgtcctgttaagtcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggaacaatctcgttccccatccgtttcacctagt
aagcagccagtctcaacttcttcaaaaacagtgaccttgttcgagcagtattgtagtggt
gggaatccatttgaaattcaggccaaccacaaagatgaagaaacggaagatgtgttggct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaggaatatgacagtgat
agtgatgttcctgaggaactcaaacgagattatgtagatgagcagacaggcgatgctcct
gtgaaaagtgtttcccgagaaaccctaaaaagtaggaagaaatcagattacagtctaaat
aaagtgaatgcacctattttaacaaatacaacgttgaatgtcataagacttgttgggaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtct
cagctatttgattactacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggacttggccttagtagtagtagactaagaacaactctaaatagaatacaa
gaaagccttattgatctggaagtttcagctgatcctactgccacactcacagcagcagaa
gaaagaaaggagaaggtaccgagcccacacctcagtcacctagtggttttgacatctggt
gatacattgtatgggttagcagaaagagtggtagccacggaatccttggtattcttggct
gaacaatttgagttccttcagccacatctggatgctgtgatgcctgcagttaaaaagccc
tttcttcagcagttttattctcagacagtttcaactgccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatgcactgtta
aaggaatttgagcagtttaacaggaggctaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatatactttgggaacattgtatacgactggctaatagaactattgtg
gaaggatatgccaatgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttgatgaaacttgaaaaactaacagatattagacccattcctgataaa
gaatttgtggaaacctatattaaagcctactacctaacggagaatgacatggaacgctgg
atcaaagagcacagggaatattcaacaaagcaactgacgaatctggtgaatgtttgcctg
ggatcccatattaataagaaagcaagacaaaaacttctagcagctatagatgatatagac
agacctaaaagataa
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