Lemur catta (Ring-tailed lemur): 123648042
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Entry
123648042 CDS
T08326
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat05012
Parkinson disease
lcat05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
123648042
05022 Pathways of neurodegeneration - multiple diseases
123648042
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Gene cluster
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
123648042
NCBI-ProteinID:
XP_045421709
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Position
12:85987424..86132516
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AA seq
961 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQTDDRSVSSSSWNCGVSALITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNENDDQKNQKVEYQKGDESGPGPQPEEPG
PGDGVGAPPGKSSEPSTSLGELEHYDLDMDEILDVPYIKSSQQLPSFTKVTSEKRILGLC
TTINGLSGKACSTGSAENSPSNMAPFCVLSPVKSPHLRKVSTVIRDPHKLSTEEPQSSPP
LAKCGSAYEPENQTFSDPHGRTVDKTMPDCQLRAFHLQSAAAEPAPEEQVSGLAWTSSQV
PEERSEYVKKVKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQGHAECLQH
LTSLMGEDCLNERNCEKLTPAGLAVKNGQLECVRWLVSETEAIAELSCSKDFPSLIHYAG
CYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYGANVTMQNH
AGEKPSQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQLLE
AQKSEGKSLPSSPSSPSSPASRKSQWKSPDADDESIAKHKAGVQEGIQVLGSLSASSRAR
AKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDVQASSRNSKKIPLEKRELKLARLR
QLMQRSLSESDTDSTNSEDPKSTPVRRADRPRPQPIVESVESVDGAESLHLMIKKHTLTS
GRRFPFGIKASKSLDGHSPSPTSESSEPDLECQYAGSGSTPPNQPSGDPTQTSPDSAAAQ
KVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQTGLELSGEKDKDRGRIFHRAST
SSESGDQLKRPFGTFRSIMETLSGNQNNNNNYQAASPLKTSTLPLTSLARKTTDAKGNPG
SSAGKGKNKAEMYSSCINLSSNTLAEERLRNSARHNDINREMKKSYSIKHIAEPESKELF
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaatatcttgatttggatgaaattgactttagtgatgacatatcttat
tcagtcacatcactcaagaccatcccggaactgtgccgaagatgtgattcgcagaccgac
gacagatcagtttctagctctagctggaattgtggcgtctcagctctcattacaaacacg
caaaagcccacaggaatcgctgatgtatacagtaagttccgcccagtgaagcgggtttcc
ccactgaaacatcagccagagactctggagaacaatgaaaatgatgaccaaaagaaccag
aaagtggagtaccagaaaggggatgagtctggcccaggcccccagccggaggagccaggc
cccggggatggagtgggtgccccgccaggtaagagctccgagcccagcacctcgctgggt
gaactggagcattacgacctcgacatggatgagattctggatgtgccttacattaaatcc
agtcaacagcttccctcttttaccaaggtgacttcagaaaaaagaattttgggtttatgc
acaaccatcaatggcctttctggcaaagcctgctctacaggaagcgccgagaactcgccg
tccaacatggcaccattttgtgttctttctcccgtgaaaagccctcacttgagaaaagta
tcaactgtcatccgtgacccccacaagctctccactgaagaaccccagagttcgcctcct
ctggctaaatgtggctctgcatatgagcctgagaaccagacctttagtgatccgcatggt
cgcacagttgacaagacaatgccagactgccagctcagggccttccatctgcagtccgca
gccgcagaacccgcgccagaagagcaggtcagtggcctggcctggaccagctcccaagtc
ccagaagaaaggagtgagtatgtgaaaaaagtaaaaagcatcttgaacatcgttaaggaa
ggacagatctctctcctgccacacctagctgcggacaatctagacaaaattcatgatgaa
aatgggaacaatctgttacacatcgctgcgtcccagggacacgccgaatgcctgcagcac
ctcacctctctgatgggagaagactgcctcaacgagcgcaactgcgagaagctgaccccg
gcgggcctggccgtcaagaatggtcagttggagtgtgtgcgctggctggtgagcgaaacg
gaagccattgcagaactgagttgttctaaggattttccaagccttattcattacgcgggt
tgctatggccaggaaaagattcttctgtggcttctccagtttatgcaggaacagggcatc
tcactggacgaagtggaccaggacggcaacagcgcggttcacgtagcctctcagcacggc
taccttgggtgcatacagaccttagttgaatatggagcgaacgtcaccatgcagaaccac
gccggggaaaagccctcccagagcgccgagcggcagggccacacgctgtgctccaggtac
ctggtggtggtggagacctgcatgtcgctggcctcgcaggtggtgaagttaaccaagcag
ctaaaggagcagacagtggaacgtgtcacgctgcagaaccaactccaacagcttctagaa
gcccagaaatcagagggcaaatcactcccttcttcacccagttcaccgtcctcacctgct
tcgagaaagtcccagtggaaatctccagatgcagacgatgagtctatagccaaacacaaa
gcaggagtccaagaagggattcaggttcttggaagcctgtcagcgtccagccgggctagg
gccaaagcgaaagacgaagattctgataaaatcctacgccagttgttgggaaaagaaatc
tcagagaatgtctgcacccaggaaaagctgtccttggaattccaggatgttcaggcttcc
tctagaaattccaaaaagatccctctggagaagagggagctgaagttagccaggctgagg
cagctgatgcagaggtccctgagcgagtctgacacggactccaccaactccgaggacccc
aagagcacccctgtgaggagggctgaccggccccggccgcagcccatcgtagagagcgtg
gagagcgtggacggcgcagagagcttacacctgatgatcaagaaacacaccttgacatct
ggacgcaggtttccctttggcatcaaggcctccaaatccctggatggccatagcccatct
cccacctcagagagcagcgaaccggacctagaatgccagtatgcaggctcggggagcact
cccccaaaccagccctcgggggaccccactcagaccagccctgacagcgctgctgcccag
aaagttgccacgagtcccaagagcgccctcaagtctccatcttccaagcgccggacgtct
cagaacttaaaactcagagttacctttgaggagcctgtggtgcaaatggagcagacgggc
cttgaactaagtggagaaaaagataaagacaggggtaggattttccatcgggcctccacg
agtagcgagtcaggggatcaactgaaaaggccctttggaacctttcgctccatcatggag
acactaagtggcaaccagaacaataacaataactaccaggcagccagcccgctgaagacc
tccacgctgcccctaacctcgctcgcaaggaagacgacagacgccaagggaaaccctggg
agctccgctggcaaaggaaagaacaaggcagagatgtacagcagctgcatcaatctttcc
tctaacacgctggctgaggagcgtctgcgtaactctgcacggcataatgacatcaataga
gaaatgaagaaatcctacagcataaagcacattgctgagccagagtcaaaagaactcttc
ttataa
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