Lemur catta (Ring-tailed lemur): 123648307
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Entry
123648307 CDS
T08326
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04066
HIF-1 signaling pathway
lcat04137
Mitophagy - animal
lcat04140
Autophagy - animal
lcat04148
Efferocytosis
lcat04659
Th17 cell differentiation
lcat04919
Thyroid hormone signaling pathway
lcat05167
Kaposi sarcoma-associated herpesvirus infection
lcat05200
Pathways in cancer
lcat05205
Proteoglycans in cancer
lcat05208
Chemical carcinogenesis - reactive oxygen species
lcat05211
Renal cell carcinoma
lcat05230
Central carbon metabolism in cancer
lcat05231
Choline metabolism in cancer
lcat05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
123648307 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123648307 (HIF1A)
04137 Mitophagy - animal
123648307 (HIF1A)
04148 Efferocytosis
123648307 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
123648307 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
123648307 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123648307 (HIF1A)
05205 Proteoglycans in cancer
123648307 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
123648307 (HIF1A)
05230 Central carbon metabolism in cancer
123648307 (HIF1A)
05231 Choline metabolism in cancer
123648307 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
123648307 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
123648307 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
123648307 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123648307 (HIF1A)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
123648307 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
123648307
NCBI-ProteinID:
XP_045421987
LinkDB
All DBs
Position
1:complement(35733402..35778117)
Genome browser
AA seq
827 aa
AA seq
DB search
MEGAGGANDKKNRISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNNNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTE
TDDQQLEEIPLYNDVMLPSSNEKLQNINLAMSPLPASETPKPLRSRADPALNQEVALKLE
PNPESLELSFTMPQIQDQPTSPSDGSTRHSSPEPNSPSEYCFYVDSDMVNEFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPQSASPQSTI
TVFQQTQIQEPTVNATTNTATTDELKTVAKDGMEDIKILIASPSPTHVHKETTSAATSPY
SDTQSRTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRTTVTKEELNPKILALQNAQRK
RKMEHDGSLFQAVGIGTLLQQPDDRAATTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLA
CRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgcgaacgacaagaaaaataggataagttctgaacgtcgaaaa
gaaaagtctagagatgcagccagatctcggcgaagtaaagaatctgaagttttttatgag
cttgctcatcagttgccacttccccacaatgtgagctcgcatcttgataaggcttctgtt
atgaggcttaccatcagctatttgcgtgtgaggaaacttctggatgctggtgatttggat
attgaagatgaaatgaaggcacagatgaattgcttttatttgaaagccctggatggtttt
gttatggttctcactgatgatggtgatatgatttacatttctgataacgtgaacaaatac
atgggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgt
gaccatgaggagatgagagaaatgcttacacacagaaatggccctgtgaaaaaaggtaaa
gagcaaaacacacagcgaagcttttttctcagaatgaagtgtactttaactagtcgaggg
agaactatgaacataaagtctgcgacatggaaggtacttcactgcacaggccatattcat
gtatatgataccaacaataaccagtctcagtgtgggtataagaaaccacccatgacgtgc
ttggtgctgatttgtgaacccattcctcatccatcaaatattgaaattcccttagatagc
aagacttttctcagtcgacacagcctggatatgaaattttcttattgtgatgaaagaatc
actgaattgatgggatatgagccagaagaacttttgggccgctcaatttatgaatactat
catgctttggactctgatcatctgaccaaaactcatcatgatatgtttactaaaggacaa
gtcaccacagggcagtacaggatgcttgccaaaagaggtggatatgtttgggttgaaact
caagcaactgtcatatataacaccaagaactctcaaccacaatgcattgtatgtgtaaat
tatgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcaccaaagttgaa
tcagaagatacaagtagcctctttgataaacttaaaaaggaacctgatgctttaactttg
ctggccccggccgctggagacacaatcatatctttagattttggcagtaatgacacagaa
actgatgaccaacaacttgaggaaattccactgtataatgatgtaatgcttccctcatct
aatgaaaaattacagaatataaatttggcaatgtctccattacctgcctcggaaactcca
aagccacttcgaagtagggctgaccctgcactcaatcaagaagttgcattgaaattagaa
ccaaatccagagtcactggaactttcttttaccatgccccagattcaagatcagccaacc
agtccttctgatggaagtactagacacagttctcctgagcctaacagtcccagtgaatat
tgtttttatgtggacagtgatatggtcaatgaattcaagttggaattggtagaaaaactt
tttgctgaagacacagaagcaaagaatccattttctactcaggacactgatttagacttg
gagatgttagccccctatatcccaatggatgatgactttcagttacgttccttcgatcag
ttgtcaccattagaaagcagttcttcaagccctcaaagtgcaagccctcaaagcacaatt
acagtattccagcagactcaaatacaagaacctactgttaatgccaccactaacactgcc
accactgatgagttaaaaacagtggcaaaagatggtatggaagacattaaaatattgatt
gcatctccatctcctacccacgtacataaagaaactactagtgctgcaacatcaccatat
agtgatactcaaagtcggacagcctcaccaaacagagcaggaaaaggagtcatagaacag
acagaaaaatctcatccaagaagccctaatgtgttatctgttgctttgagtcaaagaact
accgttactaaggaagaactaaatccaaagatactagctttgcagaatgctcagagaaag
cgaaaaatggaacatgatggttcactttttcaagcagtaggaattggaacattattacag
cagccagatgatcgtgcagctactacatcactttcttggaaacgtgtaaaaggatgcaaa
tctagtgaacagaatggaatggagcaaaagacaattattttaataccctctgatttagca
tgtagactgctggggcaatcaatggatgagagtggattaccacagctgaccagttatgat
tgtgaagttaatgctcctatacaaggcagcagaaacctactgcagggtgaagaattactc
agagctttggatcaagttaactga
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