Lemur catta (Ring-tailed lemur): 123648462
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Entry
123648462 CDS
T08326
Symbol
VCAN
Name
(RefSeq) versican core protein isoform X1
KO
K06793
versican core protein
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04514
Cell adhesion molecules
lcat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
123648462 (VCAN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123648462 (VCAN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcat00535
]
123648462 (VCAN)
00536 Glycosaminoglycan binding proteins [BR:
lcat00536
]
123648462 (VCAN)
04091 Lectins [BR:
lcat04091
]
123648462 (VCAN)
Proteoglycans [BR:
lcat00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
123648462 (VCAN)
Glycosaminoglycan binding proteins [BR:
lcat00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
123648462 (VCAN)
Lectins [BR:
lcat04091
]
C-Type lectins
Lecticans
123648462 (VCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
hEGF
EGF_TEN
Sushi
EGF_3
EGF_CA
ig
EGF_2
Motif
Other DBs
NCBI-GeneID:
123648462
NCBI-ProteinID:
XP_045422232
LinkDB
All DBs
Position
12:54135619..54235740
Genome browser
AA seq
2413 aa
AA seq
DB search
MLINIKSILWMCSTLIATHALHKVKVEKSPPVKGALSGKVSLPCHFSTMPTLPPSYNTSE
FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKVGQGYKGRVSVPTHPEDVGDASLTMVKL
RASDAGLYRCDVMYGIEDTQDSVSLAVDGVVFHYRAATSRYTLNFEMAQKACLDVGAVIA
TPEQLFAAYEDGFEQCDAGWLSDQTVRYPIRAPREGCYGDMMGKEGVRTYGFRSPRETYD
VYCYVDHLDGEVFHITAPSKFTFEEAEEQCENQDARLATVGELQAAWRNGFDQCDYGWLS
DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRRMSDLSVIGHPI
DSESKEDEPCSEETDPVHDLIDEILPGLPDIIEINIYHSEEDEEDDEECANATDVTTTPS
VQYINGKHLITTVPKDPEAAEARRGQFESVAPSQNFSDSSESETNQFIIVKTELSTAVQP
SDSKETTESLEITWKPETYPETSERFSGGEPVVSPTAPFHEAEATEGVELVTERGPELGN
QVHEHTEAVPLFPEESSGEATFDQESQKIVFSGATDVTFGEVAEKSTSIMDTSTIVPSSM
SAHVSEEESVTLLGNPQPNDPLSTHESWIEITPRQIVEISESSSVPIPEGSGEVEEYKDK
MFTMVTDLSQRNTTDTIIALDTSKVVITENPFEIPATTIYSVSEQPSAEVAPTNLVSESD
TSKWVFSTSFEGKERKEEEEGPTGTASAAEVHSPTQGSDQFILSSELESFDVATSSDSAT
WKTFMSLTTPMQSERAMTSSTPVFTEGNVLEDLGAQTMEHSSSSQPGVQEGLTTLPASPV
SLFMEQGSGEAAAVPETTTLSSFSLNIESEIPTKKETAGTLSPSVEKTFSSEPTRLVLST
VIDREVDEIISQTSKENLVSEVSGKPNHGAEIRGFSIGFPLGEDFSGDFREYSTVSYPIT
KEEIVIMEGSGDAVFRDAQISPSVIPTSVHVSGTSDSEGPSSTLISTSAFPWEEFIASAE
GSGEQLVTVGSSVGPMVPSAVEFSGTDSPFIDQALGEVDAINEADKRSTILPTVEAESTV
VPIEKGEVKVNDTISMNFPQTMEPLKLWSRQEVNTVRQEIESETASEGKIQEEKSFESPQ
SSLAPEQTIFDSQTFTETEHQTTDYSILTTKETYSTDKEMKEEGISLVNMSTPDPDAKGL
ESYTSLPEATGTPHFSLATALVTESLSAESIVTDSSIKEEESIKLFPKGMRPTIKESYTD
LLFSGLGSGEDVLPTLPTVSVNFTEMEQIINTLYPQTSQVENLETSSLSDKTGDYERMEN
VANEVKPLIFKTDNSSESSEAISSTTLIEISSDTGAERPTVTPLPFSIDTERPQNQTLRW
AEENWTSRPQTITEQDSNKNSSTAETKETATSSTVFLNRTYGLDMAKEFVTSAPKPTDLF
YEHSGEGSGELAIVDSVHTSGTTQATRQGSTTFISDRSLEKHPEVPSAKAVTADEFPTVP
VVVRLHSEQNESSPDPISTLSNTMSYERSTDAITGIVQDHFKGLEDSTLKPSRRKPTENI
IIDLDKEDKDLILTITERTVLETLPVLTSDKNTIIDIDHTKPVYEDILGMHTDIDPEISS
GSHGGNDESTQVLEKYGAAINLSLSEETFEGSGDPLLASYTQATHNESMTSEDRSQLDHM
GFNFTTGIPVPSREAELDILLPTATSLPIPSKSATENPEIEEPKIEAKALDDIFESSTLS
DGQAIADQSEIISTLGHLERTKEEYEEKKYAGPSFQPEFSSGAEETLIDHTPYVSISTVH
LVAQSLTEAPNVMEGSSSPYYIDTTSAVSAFAKLSSQTPSSPLTTYIGSGASEHTEVPQP
STLPSIDAGSSQMSPEYSFKEIHANIEATFKPSSEEYFHITEPPSLSPDTKLAPSEDESK
PKLLKETEASPTELFAEEGTEILQDFQNKTNGQLSGETIMVVPTVKIPTAGAGTVITAGN
EINIEGATRWPHATSASAPYGVEAGVVPQPSPETSEEPAIPSSFLEIYPETQTAFIRVED
STAASADQQVSARILDSNNQATVSTVELNTELATPPFSHLETSNETDFLIGINEESVEGT
AIYLPGLDRCKTNPCLHGGTCYPTETSYVCTCVPGYSGDRCELDFDECHSNPCRNGATCI
DGFNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAH
LTSILSHEEQMFVNRVGHDYQWIGLNDKMFEHDFRWTDGSTLQYENWRPNQPDSFFSAGE
DCVVIIWHENGQWNDVPCNYHLTYTCKKGTVACGQPPVVENAKTFGKMKPRYEINSLIRY
HCKDGFIQRHLPTIRCLGNGRWAMPKITCMNPSAYQRTYSKKYFKNSSSEKDNSSNTSKH
EHRWIRRWQESRR
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atgttgataaatataaagagcatcttatggatgtgctcaaccttaatagcaacccatgca
ctacataaagtcaaagtggaaaaaagcccgcctgttaagggcgccctctccgggaaagtc
agcctgccttgtcatttttcaaccatgcctactttgccacccagttacaacaccagtgaa
tttctccgaatcaaatggtctaagattgaagtggacaaaaatggaaaggatttaaaggag
acgactgtccttgtggcccaaaatgggaatattaaggttggtcagggctacaaagggaga
gtgtccgtccccacgcaccccgaggatgtgggtgatgcctccctcaccatggtcaagctg
cgtgccagtgacgcgggcctgtaccgctgcgacgtcatgtacgggattgaagacacgcag
gactcggtgtccctggccgtggatggagttgtgtttcactatagggcagcaaccagcagg
tacaccctgaattttgagatggctcagaaggcttgtttggacgttggggcagttatagca
accccggaacagctctttgccgcctatgaagatgggtttgagcagtgtgatgcaggctgg
ctgtctgatcagactgttagatatcccattcgggctccccgagaaggctgttatggagat
atgatggggaaggaaggagtcaggacctatggattccgttctcctcgggaaacttatgat
gtgtattgttacgtggatcatctggatggtgaggtgttccatatcactgctcccagtaaa
ttcacctttgaggaagctgaagaacagtgtgaaaaccaggacgccaggctggcgacggtg
ggggaactccaggcggcgtggaggaatggctttgaccagtgtgattacgggtggctgtcg
gacgccagcgtgcgccaccctgtgactgtggccagggcccagtgtggaggtggtctgctt
ggggtgagaaccctgtaccgttttgagaaccagacaggcttccctccccctgatagcaga
tttgatgcctactgctttaaacgtcgaatgagtgatttgagtgtaattggtcatccaata
gattcagaatctaaagaagatgaaccttgtagtgaagaaacagatccagtgcacgatcta
attgatgaaattttacctggcttacctgatataattgaaataaatatataccacagtgaa
gaagatgaagaagatgatgaagagtgtgcaaatgctactgacgtcacgaccaccccctcc
gtgcagtacatcaatgggaagcatctcattaccactgtgcccaaggacccagaagctgca
gaagctaggcgtggccagtttgaaagtgttgcaccttctcaaaatttctcagacagctct
gaaagtgaaaccaatcagtttataatagtcaaaacagaattgtctactgctgtgcaacct
agtgattctaaagaaacaactgaatctctcgaaattacgtggaagcctgagacttacccc
gaaacatcagaacgtttttcaggtggtgagcctgttgtttcccccacagccccattccat
gaggcagaagcaacagagggggtagaattagtcacagagagaggtcctgaacttggcaat
caggtgcatgagcatactgaagctgtccctttgtttcctgaagagtcttcaggagaggct
acctttgaccaagaatctcagaaaatagtattttcaggggccacagatgtaacatttggt
gaagtggcagaaaaaagtacttctatcatggatacttccactatagttccaagttctatg
tcagcacacgtttcagaggaagaatcagttaccctactaggaaatccacagcctaatgac
ccattatctacccatgaaagctggatagaaataacccctagacaaatcgtagagatctca
gaaagttcttcagttccaattccagaaggctctggagaagtagaagaatataaagataaa
atgttcaccatggtaacagacttatcacagagaaatactacagatacaatcattgcttta
gataccagcaaggttgttatcacagaaaacccttttgagattcctgcgactaccatttat
tcagtttctgaacaaccttctgcagaagtggcgcctaccaatcttgtaagtgaatcagac
acttccaagtgggttttcagtacatcttttgagggaaaggaaagaaaagaggaggaagaa
ggacctacaggtacagcttctgcagctgaggtacattcacctacacagggatcagatcaa
ttcattttatcctctgaattagaaagttttgatgtagctacatctagtgattcagctacc
tggaagacttttatgtccttgacaacacccatgcagtctgaaagagcaatgacaagttct
acccctgtctttacagaaggaaatgttttagaagatttgggggcacagaccatggagcac
agcagtagcagccaacctggggtacaggaggggctgaccactctcccagctagccctgtc
tctctctttatggagcagggctctggagaagctgctgctgttccagaaaccaccactctt
tcttcattttcattaaatatagagtctgaaattccaaccaaaaaggaaacagctggcact
ttgtctcccagtgtggaaaaaacattctcctctgagccaacacgactagttttgagtact
gtaatagacagagaagttgatgaaattataagtcaaacatccaaggaaaatttggtttca
gaggtatcaggaaaaccaaatcatggggcagaaataaggggcttttctataggttttcct
ctgggggaagatttcagcggtgactttagggaatactcaacagtatcttatcccatcaca
aaagaagaaatagtgataatggaaggctctggggatgcagtatttagggatgcccagatt
tcaccatctgtgatacctacttcagttcatgtcagtggcacctctgactcggagggaccc
agtagcaccttgatcagcacttcagccttcccttgggaagagttcatagcctcagctgag
ggttcaggagagcaactggtcacagtaggcagctctgttggcccaatggtccccagtgct
gtggagttttctggtacagattccccatttattgaccaagcattgggagaagtggatgct
atcaatgaagctgataaaagatccaccattttgccaacagtagaagctgaaagtactgtg
gttccaatagaaaagggggaagtaaaggtcaatgacacaatttcaatgaactttcctcaa
actatggagccactcaaattatggtcaaggcaagaagtcaacactgtaagacaagaaatt
gaaagtgaaacagcatcagagggaaagattcaagaagaaaagtcttttgaatcccctcaa
agctctcttgcaccagagcaaacaatttttgactcacagacgtttactgaaactgaacac
caaaccacagattattctatactaacaacaaaggaaacttacagtactgataaggaaatg
aaggaggaaggcatttccttagttaacatgtctactccagatccagatgcaaaaggcttg
gaatcatatacttctctccctgaagctactggaacaccacatttttccttagctactgcc
ttagtgactgagtctctatcagctgaaagtatagtcactgattcatcaatcaaagaggaa
gaaagtataaaactctttccaaaaggtatgagaccaacaattaaagagtcgtatactgac
ctcttattctctggactgggatcaggagaagacgttttgcctactctacctacagtgtca
gtgaattttactgaaatggaacaaatcattaacacattatatccccagacttctcaagtg
gaaaatttagaaacaagcagtttaagtgataaaactggagattatgagagaatggaaaat
gtggcaaatgaagttaaaccactcattttcaaaacagataacagctctgaaagtagtgag
gcaatatccagcacaaccttaatagagatttcaagtgacactggagcagaaagacccact
gtgacacctctccctttctctatagacactgaacgtcctcaaaatcagactctcaggtgg
gcagaagaaaactggactagtagaccacaaactataactgaacaagactctaacaagaat
tcttcaacagcagaaactaaagaaacagcaacctcttccactgtttttctgaatagaact
tatggtcttgacatggccaaagaatttgttacttcagctccaaagccaactgacttattt
tatgaacattctggagaaggatctggagaattggctattgttgattcagttcacacttct
ggaactactcaggcaaccagacaaggaagcaccacatttatttctgacagatccctggaa
aaacatcctgaggttccaagtgctaaagctgttactgctgatgaattcccaacagttcca
gtggttgtgcgtcttcattcagagcagaatgaaagctcccctgatccaattagcacactg
tcaaatacaatgtcatatgagaggtccacagatgctatcacaggtattgttcaggaccat
ttcaagggacttgaggattctaccttaaaacccagcagaagaaaacccactgaaaatatt
attatagatctggacaaagaggacaaggatttaatattgacaattacagagagaaccgtc
cttgaaactctacctgtgctgacatcagataaaaatactatcatagatattgatcacact
aaacctgtatatgaagacatccttgggatgcacacagacatagatccagagatatcatca
ggatcacatggcggtaatgatgaaagcactcaagttctagagaagtatggggcagctatt
aacctttctttatctgaggaaacatttgagggctctggtgatcctcttctggccagctac
actcaggcaacacataatgaatcaatgacttctgaagatagaagccaattagatcacatg
ggctttaacttcacaactgggatccctgttcctagcagggaagcagaattagatatttta
cttcccacagcaacatccctgcccattcctagtaagtctgccacagagaatccagagatt
gaagaaccaaaaattgaagcaaaagccctggatgacatctttgaatcaagcactttgtct
gatggtcaagctattgcagaccaaagtgaaataatatcaacattaggccatttggaaagg
acaaaggaggagtatgaagaaaagaaatatgcaggtccttcttttcagccagaattctct
tcaggagctgaggagacattgatagatcatactccctatgtaagtatcagtactgtccac
cttgtggctcagagtctgacagaagcacctaatgtgatggaaggatccagttccccatat
tatattgatacaacctcagcagtgtcagcatttgcaaagttgtcttctcagacaccatca
tctccactcactacctacataggcagtggagcctctgaacacacagaggtaccccagcca
agtactctgccaagtatagatgctggctcatctcagatgtccccagagtattcttttaag
gaaattcatgcaaatattgaagcaactttcaaaccatcaagtgaagaatactttcacata
actgagcctccgtccttatctcctgacacaaaattagcaccttcagaagatgaaagtaaa
cctaaattattaaaagaaacggaagcttctcccacagaattatttgctgaagaaggaact
gagattctacaagatttccaaaacaaaaccaatggtcaactttctggagaaacaatcatg
gtggttcccactgttaaaataccaacagctggggctggaactgttattacagctggcaat
gaaattaacatagaaggtgctacacggtggccacatgctacttctgcttctgctccttat
ggggttgaggcaggtgtggtgcctcagcccagcccagagacttctgaagagcctgccatt
ccttcttcttttctggaaatctaccctgaaacacaaacagcttttatcagagtggaggat
tccacggcagcatcagcagatcagcaagtatcggcgagaattcttgattccaataatcag
gcaacagtaagcaccgtggaattaaatactgagcttgcaacaccaccattttcccatctg
gaaacttctaatgaaactgatttcctgattggcattaatgaagagtcagtggaaggcaca
gcaatctatttaccaggacttgatcgttgcaaaacgaacccgtgccttcatggaggcacc
tgttaccctactgaaacttcgtatgtatgtacctgtgtcccaggatacagtggagaccgg
tgtgaacttgattttgatgaatgtcactctaatccctgtcggaatggagccacgtgcatt
gatggttttaacacattcagatgcctctgccttccaagctatgttggtgcactttgtgaa
caagacactgagacgtgtgactatggctggcacaaattccaagggcagtgctacaaatac
ttcgcccatcgacgcacatgggatgcagctgaacgggaatgtcgtctgcagggcgcccat
ctcacaagcatcctgtctcacgaagaacaaatgtttgtgaatcgtgtgggtcatgattat
cagtggataggcctcaatgacaagatgtttgagcatgacttccgttggactgatggcagc
acactgcaatatgagaactggaggcccaaccagccagacagcttcttttctgctggagaa
gactgtgttgtaatcatctggcatgagaacggccagtggaatgacgttccctgcaattac
catctcacctatacctgcaagaaaggaacagttgcttgtggccagccccctgttgtagaa
aatgccaagacctttggaaagatgaaacctcgttatgaaatcaactccttgattagatat
cactgcaaagatggtttcattcaacgccaccttccaactatccggtgcctaggaaatgga
agatgggctatgcctaaaattacctgcatgaacccatctgcataccaaaggacttattct
aagaaatactttaaaaattcctcatcagaaaaggacaattcatcaaatacatcaaaacat
gaacatcgttggatccggagatggcaggagtcgaggcgctga
DBGET
integrated database retrieval system