Lemur catta (Ring-tailed lemur): 123648481
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Entry
123648481 CDS
T08326
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123648481 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123648481 (TNPO1)
03009 Ribosome biogenesis [BR:
lcat03009
]
123648481 (TNPO1)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123648481 (TNPO1)
Ribosome biogenesis [BR:
lcat03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
123648481 (TNPO1)
Pre-60S particles
123648481 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
IBN_N
Cnd1
TPR_IPO5
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
Ltn1_1st
HEAT_Maestro
INTS7_N
HEAT_GCN1_C_2
UNC45-central
TPR_TTI1_C
Dopey_N
VPS15-like_hel
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
123648481
NCBI-ProteinID:
XP_045422270
LinkDB
All DBs
Position
12:45736356..45824854
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AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEMDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaaggactt
cagcaaatcctgcagctgttgaaggagtcccagtccccagacaccaccatccagagaacc
gtgcaacaaaaactggaacaactcaatcaatatccagattttaacaactacttgattttt
gtccttacaaaattaaaatctgaagatgaacctacgagatcactgagtggtctcatcttg
aagaataatgtgaaagcacattttcagaacttcccaaatggtgtaacagactttattaaa
agtgaatgtttaaataatattggtgactcctctcctctgattagagccacggttggtatt
ttgattacaaccatagcctccaagggagaattgcagaattggcctgacctcttaccaaaa
ctctgtagcctgttggattctgaagattacaacacctgtgagggagcatttggagccctt
cagaagatatgtgaagattctgctgagattttagatagtgatgttttagatcgtcctctc
aacattatgattcccaaatttttgcaattcttcaagcacagtagtccaaaaataaggtct
catgctgttgcatgtgtcaatcagtttatcattagcagaactcaagctctgatgttgcac
attgattcttttattgagaatctgtttgcactggctggtgatgaagaaccggaggtacgg
aaaaatgtgtgccgggcccttgtgatgttgcttgaagttcgaatggatcgcctgcttcct
cacatgcataatatagttgagtacatgctgcagaggactcaagatcaagatgaaaatgtg
gctttagaagcctgtgaattttggctaactttagctgagcaaccaatatgcaaagatgta
ctcgtaaggcatcttcctaagctaattcctgtgttagtgaatggcatgaagtactcagat
atagatatcatcctgcttaagggtgatgttgaagaagatgaaacaattcctgatagtgaa
caggatataaggccacgttttcaccgatcaaggacagtggctcagcagcatgatgaagat
ggaattgaagaagaagatgatgatgatgatgaaatggatgatgacgatacaatttctgac
tggaatctaagaaaatgttctgctgctgccctagatgttcttgcaaatgtgtatcgtgat
gagctactgccgcatattttgccccttttgaaagaattactttttcatcatgaatgggtt
gttaaagaatcaggcatcttggtattaggagcaattgctgaaggctgcatgcaaggcatg
attccatacctgcctgagctcattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacatgctggactcttagccgctatgcacactgggtagtcagccag
ccaccagacacgtacctgaagccattaatgacggaactgctaaagcgcatcctggatagc
aacaagagagtacaagaagctgcctgcagtgcctttgctaccctagaagaggaggcctgt
acagaacttgttccttaccttgcttatatacttgataccctggtcttcgcgtttagtaaa
taccaacataagaacctgctcattctctatgatgccataggaacattagcagattcagta
ggacatcatttaaacaagccagaatatattcagatgctaatgcctccactgatccagaaa
tggaatatgttaaaggatgaagataaagatctcttccctttacttgagtgcctatcttcg
gttgccacagccttgcagtctggctttcttccatactgtgaacctgtgtatcagcgttgt
gtaaacctagtacagaagactcttgcacaagccatgctgaacaatgctcaacctgatcaa
tatgaggctccagataaagattttatgatagtggctcttgatttactgagtggtctggct
gaaggactgggaggcaacattgaacaactggtagcccgaagtaacatcctaacactaatg
tatcagtgcatgcaggataaaatgccagaagttcggcagagttcttttgccctattaggt
gacctgacgaaagcttgctttcaacatgttaagccttgtatagctgatttcatgccaata
ttgggaacaaacctaaatccagagttcatttcagtctgcaacaatgccacatgggcaatt
ggagaaatctccattcaaatgggtatagagatgcagccttatattcctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaatacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgcacctctctgagaaacataagagacaatgaggaaaaggattcc
gcattccgtgggatttgtaccatgatcagtgtgaatcccagtggcgtaatccaagatttt
atatttttttgtgatgcagttgcatcatggattaacccaaaagatgatctcagagacatg
ttctgtaagatccttcatggatttaaaaatcaagttggggatgaaaattggaggcgtttc
tctgaccagtttcctcttcccttaaaagagcgtcttgcagctttttatggtgtttaa
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